iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057998

Ensembl Protein ID

AES76795

UniProt Accession

G7KNZ9; A0A0C3VZJ7; G7KNZ9_MEDTR

Genbank Protein ID

AES76795.2

Protein Name

RING-H2 finger protein ATL4J

Genbank Nucleotide ID

CM001222

Gene Name

MTR_6g087150

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_6g087150	AES76795	AES76795

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-08	36.4	119	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ f+d   +++lp C+H+fh dC+ +w        k+ +CP+Cr
   Q: 119  CSICLSKFEDIeiLRLLPkCKHAFHIDCIDHW------LEKHSSCPICR 161
           ********7723355666**************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MMNQFGITLL ILSTLFFHIR AQSPTQTTNS QDAVSNFQPS LVVVIAILGL MFSLTFILLI 60
FAKVCHRRQL LPISDDPNNQ LATLMRSRSR FSGIDKTAIE SLPFFKFSSL KGSKQGLECS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCGTTTCTT TAAAAACTGG AGGGTTAAGG TCAAGATATA AAAATTCCAA AACAAAATTA 60
ATTATAAAAA TTGTTAAGCT TTGAAGTTTC AACTCATCAA TTAGAATTTA TGTACTTATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_6g087150

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002959	Amborella trichopoda	46.25	1.00e-72	266.00
IUUC-Aly-005935	Arabidopsis lyrata	45.06	2.00e-83	302.00
IUUC-Ath-006742	Arabidopsis thaliana	46.95	6.00e-73	267.00
IUUC-Bol-015696	Brassica oleracea	44.42	5.00e-73	267.00
IUUC-Bra-017430	Brassica rapa	44.09	1.00e-72	266.00
IUUC-Cgl-026601	Colletotrichum gloeosporioides	41.98	1.00e-08	54.30
IUUC-Gma-043589	Glycine max	58.31	9.00e-123	432.00
IUUC-Oba-075667	Oryza barthii	32.95	1.00e-40	160.00
IUUC-Ogl-077500	Oryza glaberrima	32.95	1.00e-40	160.00
IUUC-Ogu-078252	Oryza glumaepatula	33.05	1.00e-42	166.00
IUUC-Oni-082687	Oryza nivara	32.95	1.00e-40	160.00
IUUC-Oru-084787	Oryza rufipogon	33.14	4.00e-41	161.00
IUUC-Osa-085704	Oryza sativa	32.95	1.00e-40	160.00
IUUC-Pop-099837	Populus trichocarpa	45.56	1.00e-81	296.00
IUUC-Ppe-101585	Prunus persica	46.93	1.00e-92	332.00
IUUC-Sly-111674	Solanum lycopersicum	50.00	7.00e-89	319.00
IUUC-Stu-111967	Solanum tuberosum	46.91	2.00e-84	305.00
IUUC-Sbi-114371	Sorghum bicolor	35.21	1.00e-38	153.00
IUUC-Tca-121197	Theobroma cacao	50.43	2.00e-87	315.00
IUUC-Vvi-131412	Vitis vinifera	56.29	7.00e-84	303.00
IUUC-Yli-134336	Yarrowia lipolytica	43.66	6.00e-12	65.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence