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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105340
UUCD1 version UUC-RaN-01097
Ensembl Protein ID ENSRNOP00000060530.2
UniProt Accession D3ZNQ4; D3ZNQ4_RAT
Genbank Protein ID EDM06751.1
Protein Name Ubiquitin specific protease 36 (Predicted); Ubiquitin-specific peptidase 36
Genbank Nucleotide ID AABR07030875
Gene Name Usp36; Usp36_predicted; rCG_35503
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000028255.6 ENSRNOT00000064450.3 ENSRNOP00000060530.2
ENSRNOG00000028255.6 ENSRNOT00000084055.1 ENSRNOP00000071284.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 2.80e-80 270.4 123 421
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP
   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeq 89
           Gl+NlgNtC++NS++QcL+ +p+l+++ll+ ++ ++++     + + ++l+ +q+ + +   ++ +a++p ++++ lkk+a++f+  +q
   Q: 123  GLHNLGNTCFLNSTIQCLTYTPPLANYLLSkEHARSCH-----QGSFCMLCVMQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQ 206
           9*****************************33333333.....457899999999999999**************************** PP
   S: 90   qDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpg 178
           +Da+Efl++ +d++++++                  l+  a+ + +++ ++l++++F+g l+s++kc  c++vs +++p ld+ l++++
   Q: 207  EDAHEFLRYTIDAMQKAC------------------LNGYAKLDRQTQATTLVHQIFGGYLRSRVKCSVCRSVSDTYDPYLDIALEIRQ 277
           ******************..................444556788999***************************************** PP
   S: 179  keetkkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts 267
                  ++  +Le f+k + l gen+y c kckkk+ a+k++++++ ++vL+l LkRf    ++ s  ki+k v +p+ L+++p++++
   Q: 278  AA-----NIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFSIHRTSNVLTLSLKRF----ANFSGGKITKDVGYPEFLNIRPYMSQ 357
           **.....9***************************************************....668899******************** PP
   S: 268  peekqkekkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYk 336
           ++ +   ++ Y L+av+vHsG s++ GHY++yvk ++g+W++++Ds V++++ + vl+   ++aYvlfY 
   Q: 358  SSGD---PVMYGLYAVLVHSGySCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLS---QQAYVLFYL 421
           5544...9**************************************************...********6 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MPIVDKLKEA LKPGRKDSAE DGDLGKLLAA SAKKVLLQRI EFEPASKSFS YQLESLKSKY 60
VLLNPKAEGA GRHRSGDEPQ ARKPGTERMS GSGGDGVPAP QKVLFPVERL SLRWERVFRV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105340|DUB,USP|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGCCTCTTAA AGCGACCGCG CCCTCCATGC GGACTCCGGG AAGCACCCCG CAGTGCCGCT 60
CCTTTAAACG TCTTGGTGAC ACGTGTGTGA GGCTCTGAAG GCCCGGATGG TGCGCATGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105340|DUB,USP|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome
Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
Pfam

PF00443--UCH
Gene Ontology

GO:0016607--C:nuclear speck
GO:0005730--C:nucleolus
GO:0003723--F:RNA binding
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:1903955--P:positive regulation of protein targeting to mitochondrion
GO:0016579--P:protein deubiquitination
GO:1903146--P:regulation of mitophagy
GO:0006511--P:ubiquitin-dependent protein catabolic process
KEGG rno:303700
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002092 Ailuropoda melanoleuca 73.32 0.00e+00 1030.00
IUUC-Aca-005360 Anolis carolinensis 64.66 0.00e+00 896.00
IUUC-Bta-013047 Bos taurus 70.98 0.00e+00 971.00
IUUC-Bdi-014036 Brachypodium distachyon 44.94 6.00e-84 305.00
IUUC-Cja-019203 Callithrix jacchus 70.83 0.00e+00 1031.00
IUUC-Cfa-020586 Canis familiaris 69.63 0.00e+00 1075.00
IUUC-Cpo-021804 Cavia porcellus 75.27 0.00e+00 1088.00
IUUC-Cre-022988 Chlamydomonas reinhardtii 47.98 5.00e-53 201.00
IUUC-Csa-023137 Chlorocebus sabaeus 73.01 0.00e+00 1115.00
IUUC-Cin-025230 Ciona intestinalis 52.57 8.00e-98 350.00
IUUC-Cne-027049 Cryptococcus neoformans 33.61 5.00e-39 155.00
IUUC-Cme-027339 Cyanidioschyzon merolae 37.03 2.00e-62 233.00
IUUC-Dre-028587 Danio rerio 72.73 0.00e+00 814.00
IUUC-Dno-029149 Dasypus novemcinctus 72.12 0.00e+00 1013.00
IUUC-Dor-030836 Dipodomys ordii 70.74 0.00e+00 1007.00
IUUC-Dme-032119 Drosophila melanogaster 35.14 9.00e-72 265.00
IUUC-Ete-032567 Echinops telfairi 67.17 0.00e+00 850.00
IUUC-Eca-033600 Equus caballus 63.79 0.00e+00 1093.00
IUUC-Eeu-035206 Erinaceus europaeus 83.12 4.00e-66 246.00
IUUC-Fca-036392 Felis catus 60.18 4.00e-132 465.00
IUUC-Fal-036852 Ficedula albicollis 69.19 2.00e-161 563.00
IUUC-Gmo-039033 Gadus morhua 72.11 0.00e+00 801.00
IUUC-Gga-040664 Gallus gallus 76.98 0.00e+00 760.00
IUUC-Ggo-045437 Gorilla gorilla 73.77 0.00e+00 1109.00
IUUC-Hsa-046863 Homo sapiens 73.04 0.00e+00 1118.00
IUUC-Itr-048655 Ictidomys tridecemlineatus 73.09 0.00e+00 1175.00
IUUC-Lch-050120 Latimeria chalumnae 59.85 0.00e+00 750.00
IUUC-Lpe-051574 Leersia perrieri 41.94 6.00e-79 288.00
IUUC-Loc-052796 Lepisosteus oculatus 73.15 0.00e+00 788.00
IUUC-Laf-054243 Loxodonta africana 67.54 0.00e+00 1031.00
IUUC-Mcc-055762 Macaca mulatta 72.90 0.00e+00 1091.00
IUUC-Meu-056697 Macropus eugenii 70.18 0.00e+00 1014.00
IUUC-Mtr-058537 Medicago truncatula 44.35 4.00e-86 312.00
IUUC-Mla-059049 Melampsora laricipopulina 40.46 1.00e-58 221.00
IUUC-Mga-059359 Meleagris gallopavo 78.84 2.00e-157 550.00
IUUC-Mmr-060966 Microcebus murinus 67.86 0.00e+00 1028.00
IUUC-Mdo-062733 Monodelphis domestica 60.43 0.00e+00 1071.00
IUUC-Mmu-064331 Mus musculus 89.51 0.00e+00 1493.00
IUUC-Mac-065039 Musa acuminata 39.49 9.00e-87 315.00
IUUC-Mpu-065759 Mustela putorius furo 66.60 0.00e+00 964.00
IUUC-Mlu-067371 Myotis lucifugus 65.12 0.00e+00 994.00
IUUC-Nle-070087 Nomascus leucogenys 72.68 0.00e+00 1085.00
IUUC-Opr-070729 Ochotona princeps 63.81 0.00e+00 933.00
IUUC-Ont-071346 Oreochromis niloticus 77.69 0.00e+00 803.00
IUUC-Oan-072931 Ornithorhynchus anatinus 66.76 0.00e+00 842.00
IUUC-Ocu-074823 Oryctolagus cuniculus 63.20 0.00e+00 907.00
IUUC-Oba-075866 Oryza barthii 41.95 1.00e-82 301.00
IUUC-Obr-076408 Oryza brachyantha 42.23 3.00e-84 306.00
IUUC-Ogl-077559 Oryza glaberrima 45.25 2.00e-83 304.00
IUUC-Ogu-078064 Oryza glumaepatula 41.94 1.00e-83 305.00
IUUC-Oin-079471 Oryza indica 45.25 2.00e-83 304.00
IUUC-Olo-080231 Oryza longistaminata 43.35 1.00e-75 278.00
IUUC-Ome-081746 Oryza meridionalis 42.57 3.00e-83 303.00
IUUC-Oni-082339 Oryza nivara 43.02 5.00e-84 305.00
IUUC-Opu-083194 Oryza punctata 42.73 5.00e-84 306.00
IUUC-Oru-085083 Oryza rufipogon 42.73 1.00e-83 304.00
IUUC-Osa-085395 Oryza sativa 45.25 1.00e-83 305.00
IUUC-Ola-087255 Oryzias latipes 72.25 0.00e+00 816.00
IUUC-Olu-087773 Ostreococcus lucimarinus 44.76 8.00e-72 263.00
IUUC-Oga-088818 Otolemur garnettii 71.05 0.00e+00 1076.00
IUUC-Oar-089410 Ovis aries 69.34 0.00e+00 963.00
IUUC-Ptr-090680 Pan troglodytes 69.26 0.00e+00 1104.00
IUUC-Pan-092482 Papio anubis 72.68 0.00e+00 1105.00
IUUC-Ppa-095853 Physcomitrella patens 45.59 6.00e-92 332.00
IUUC-Pfo-096807 Poecilia formosa 72.61 0.00e+00 830.00
IUUC-Pab-098724 Pongo abelii 73.77 0.00e+00 1134.00
IUUC-Pop-099693 Populus trichocarpa 40.56 1.00e-82 301.00
IUUC-Pca-100117 Procavia capensis 75.66 2.00e-149 523.00
IUUC-Pva-102883 Pteropus vampyrus 65.87 0.00e+00 818.00
IUUC-Pgr-103270 Puccinia graminis 45.94 1.00e-68 254.00
IUUC-Ptt-103887 Puccinia triticina 45.31 2.00e-68 253.00
IUUC-Sha-107019 Sarcophilus harrisii 69.84 0.00e+00 996.00
IUUC-Sja-107805 Schizosaccharomyces japonicus 41.80 1.00e-77 283.00
IUUC-Spo-108119 Schizosaccharomyces pombe 44.88 6.00e-83 301.00
IUUC-Sit-110536 Setaria italica 42.35 2.00e-78 287.00
IUUC-Sly-111722 Solanum lycopersicum 38.98 5.00e-79 289.00
IUUC-Stu-112912 Solanum tuberosum 39.31 3.00e-79 290.00
IUUC-Sbi-114477 Sorghum bicolor 42.82 4.00e-85 309.00
IUUC-Sre-114924 Sporisorium reilianum 40.06 5.00e-65 242.00
IUUC-Ssc-116022 Sus scrofa 82.28 0.00e+00 868.00
IUUC-Tgu-116976 Taeniopygia guttata 71.76 2.00e-162 565.00
IUUC-Tru-118391 Takifugu rubripes 62.52 0.00e+00 816.00
IUUC-Tsy-119253 Tarsius syrichta 59.64 0.00e+00 694.00
IUUC-Tni-120064 Tetraodon nigroviridis 77.48 0.00e+00 798.00
IUUC-Tae-122827 Triticum aestivum 41.08 3.00e-89 323.00
IUUC-Tur-126014 Triticum urartu 46.73 4.00e-83 303.00
IUUC-Tbe-127377 Tupaia belangeri 53.62 0.00e+00 684.00
IUUC-Ttr-129259 Tursiops truncatus 80.83 0.00e+00 746.00
IUUC-Uma-129416 Ustilago maydis 42.90 5.00e-67 249.00
IUUC-Vpa-130568 Vicugna pacos 66.67 3.00e-44 173.00
IUUC-Xtr-132944 Xenopus tropicalis 76.78 0.00e+00 671.00
IUUC-Xma-133735 Xiphophorus maculatus 73.33 0.00e+00 823.00
Created Date 25-Jun-2017

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