iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051512

Ensembl Protein ID

LPERR03G28650.3

UniProt Accession

A0A0D9VZ02; A0A0D9VZ02_9ORYZ

Protein Name

PHD finger protein ING

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR03G28650	LPERR03G28650.1	LPERR03G28650.1
LPERR03G28650	LPERR03G28650.3	LPERR03G28650.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	6.60e-09	36.7	202	252

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCek..Cr..ewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C++ + ++  ++ C++  C+  ewfH+ C++l+  e++ +  kw+Cp Cr+
   Q: 202  TYC-ICHQISYGD--MIACDNesCEggEWFHYSCVGLT-PETRFKG-KWFCPTCRN 252
           69*.********9..*******99999***********.4444444.4******85 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MAIARTGVYV DDYLEYSSTL AGDLQRILST MRELDERAHG IMGQTKDQIK YILGAPSHGF 60
DRSNMDDDES ASERMKRDIE ASQDNALSLC TEKVLLARQA YDLIESHIKR LDEDLGQFAE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCCATCCT TGTCCAGTCC GCCCTCCGAA CTGCCCCGTT TGCCGACCGA CGACCTTCTC 60
CGAAACCCTA ATCCCCAAAT CGAAGGATCG AAACCGCCGG ATCCATCCTC CAATCGACAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028652--ING2_plant-typ
IPR028651--ING_fam
IPR024610--ING_N_histone_binding
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF12998--ING
PF00628--PHD

SMART

SM01408--ING
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0016569--P:covalent chromatin modification

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002435	Amborella trichopoda	68.65	7.00e-96	342.00
IUUC-Ath-006578	Arabidopsis thaliana	63.85	2.00e-88	317.00
IUUC-Bdi-014650	Brachypodium distachyon	85.88	1.00e-127	448.00
IUUC-Bol-015751	Brassica oleracea	64.09	8.00e-96	342.00
IUUC-Bra-017962	Brassica rapa	63.74	2.00e-96	344.00
IUUC-Cel-018700	Caenorhabditis elegans	42.00	4.00e-05	43.50
IUUC-Csv-026288	Ciona savignyi	30.22	4.00e-29	120.00
IUUC-Gma-044224	Glycine max	67.31	1.00e-97	348.00
IUUC-Hvu-047275	Hordeum vulgare	84.50	4.00e-129	452.00
IUUC-Mtr-058288	Medicago truncatula	64.26	3.00e-99	353.00
IUUC-Mac-065671	Musa acuminata	72.83	2.00e-112	397.00
IUUC-Mlu-067754	Myotis lucifugus	33.84	3.00e-32	131.00
IUUC-Obr-076822	Oryza brachyantha	95.26	6.00e-147	512.00
IUUC-Ogl-077432	Oryza glaberrima	94.47	2.00e-145	507.00
IUUC-Osa-085802	Oryza sativa	94.47	2.00e-145	507.00
IUUC-Olu-087851	Ostreococcus lucimarinus	58.49	3.00e-17	80.90
IUUC-Ppa-096009	Physcomitrella patens	56.65	6.00e-80	289.00
IUUC-Pop-099544	Populus trichocarpa	63.30	2.00e-85	308.00
IUUC-Ppe-101698	Prunus persica	66.15	2.00e-82	297.00
IUUC-Pte-104284	Pyrenophora teres	56.90	2.00e-15	77.00
IUUC-Smo-108678	Selaginella moellendorffii	60.00	1.00e-84	305.00
IUUC-Sit-110189	Setaria italica	88.98	5.00e-129	452.00
IUUC-Sly-111209	Solanum lycopersicum	67.70	2.00e-90	324.00
IUUC-Stu-112762	Solanum tuberosum	67.70	3.00e-90	323.00
IUUC-Sbi-114379	Sorghum bicolor	87.80	4.00e-135	472.00
IUUC-Tca-121271	Theobroma cacao	67.95	2.00e-90	324.00
IUUC-Tae-122798	Triticum aestivum	84.50	2.00e-128	450.00
IUUC-Vvi-131583	Vitis vinifera	67.06	5.00e-99	352.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence