iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098376

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01383856

Gene Name

POC1A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000013816.2	ENSPPYT00000016075.2	ENSPPYP00000015462.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-58	192.2	144	182
UBD/Beta-Prp	8.00e-82	274.8	17	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           H ++v+c +f +d +l+vs+sdD+t+k+WD ++  +++s
   Q: 144  HINWVRCAKFsPDgRLIVSASDDKTVKLWDKSSRECVHS 182
           999********999****************999888875 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghed 95
           g h + +tcv+fs ++++la+gs+d+++ vw +++++   ++ gh+++vt+v+fsp+g +l++gs+D+t+++w ++      ++++h++
   Q: 17   G-HRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTAFRAHTA 104
           4.5557778***999999*******************************************************8887777779999*** PP
   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvy 184
           +v+s++f+ +g+++v++s+d+ti+vw ++ ++ l   ls+h  +v+c++++pdg+l+vs+s+D+tv+lWd ++ ++++   + h + v+
   Q: 105  TVRSVHFCSDGQSFVTASDDKTIKVWATHRQKFLF-SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCE-HGGFVT 191
           **************************999999998.********************************************98.****** PP
   S: 185  slsfdsngkelvsgsldgtvklwdlqtgecvrtlngh 221
            ++f+++g++++++++d+tvk+wd++t + ++ ++ h
   Q: 192  YVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLH 228
           ****************************999999877 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MAAPCAEDPS LERHFKGHRD AVTCVDFSIN TKQLASGSMD SCLMVWHMKP QSRAYRFTGH 60
KDAVTCVNFS PSGHLLASGS RDKTVRIWVP NVKGESTAFR AHTATVRSVH FCSDGQSFVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCAGCTGC CTTCGGCGCC GCCATCCCCG CCATGGCTGC GCCCTGCGCG GTAAGCCCAG 60
CCAAGTGCAA CTCCCCAGGC CTCAGTCTCC CCGCTGGGAT ACTGGGCGCC TAGTGGCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0003431--P:growth plate cartilage chondrocyte development
GO:0007052--P:mitotic spindle organization
GO:1905515--P:non-motile cilium assembly
GO:0010825--P:positive regulation of centrosome duplication
GO:0007283--P:spermatogenesis

KEGG

pon:100435367

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001513	Ailuropoda melanoleuca	94.01	0.00e+00	760.00
IUUC-Apl-003466	Anas platyrhynchos	77.25	0.00e+00	646.00
IUUC-Aca-004323	Anolis carolinensis	70.95	0.00e+00	634.00
IUUC-Bta-012484	Bos taurus	92.87	0.00e+00	792.00
IUUC-Cja-019067	Callithrix jacchus	95.54	0.00e+00	803.00
IUUC-Cfa-020439	Canis familiaris	93.12	0.00e+00	795.00
IUUC-Cpo-021403	Cavia porcellus	91.77	0.00e+00	784.00
IUUC-Cre-022724	Chlamydomonas reinhardtii	50.38	5.00e-112	397.00
IUUC-Csa-023479	Chlorocebus sabaeus	98.10	0.00e+00	721.00
IUUC-Cho-024354	Choloepus hoffmanni	88.64	3.00e-115	406.00
IUUC-Cin-025258	Ciona intestinalis	72.31	2.00e-141	495.00
IUUC-Csv-025955	Ciona savignyi	64.12	1.00e-147	515.00
IUUC-Dno-029467	Dasypus novemcinctus	78.40	1.00e-128	451.00
IUUC-Dor-030399	Dipodomys ordii	89.68	0.00e+00	769.00
IUUC-Eca-034425	Equus caballus	93.52	0.00e+00	756.00
IUUC-Eeu-034607	Erinaceus europaeus	80.59	0.00e+00	643.00
IUUC-Fca-035627	Felis catus	94.76	0.00e+00	773.00
IUUC-Fal-037381	Ficedula albicollis	74.20	0.00e+00	631.00
IUUC-Gmo-038489	Gadus morhua	68.26	3.00e-161	560.00
IUUC-Gga-040559	Gallus gallus	74.75	1.00e-180	625.00
IUUC-Gac-041453	Gasterosteus aculeatus	70.27	2.00e-172	598.00
IUUC-Ggo-044773	Gorilla gorilla	98.77	0.00e+00	802.00
IUUC-Hsa-045823	Homo sapiens	99.02	0.00e+00	806.00
IUUC-Itr-048560	Ictidomys tridecemlineatus	93.27	0.00e+00	797.00
IUUC-Lch-050558	Latimeria chalumnae	68.12	5.00e-177	613.00
IUUC-Loc-052836	Lepisosteus oculatus	68.74	3.00e-176	611.00
IUUC-Laf-053974	Loxodonta africana	84.37	0.00e+00	681.00
IUUC-Mcc-055494	Macaca mulatta	96.06	0.00e+00	773.00
IUUC-Meu-056646	Macropus eugenii	74.49	4.00e-130	457.00
IUUC-Mga-059295	Meleagris gallopavo	67.34	1.00e-172	599.00
IUUC-Mmr-061040	Microcebus murinus	94.10	0.00e+00	804.00
IUUC-Mdo-062519	Monodelphis domestica	77.78	4.00e-176	610.00
IUUC-Mmu-063759	Mus musculus	93.67	4.00e-172	597.00
IUUC-Mpu-066442	Mustela putorius furo	93.12	0.00e+00	773.00
IUUC-Mlu-068163	Myotis lucifugus	91.38	0.00e+00	769.00
IUUC-Nle-070160	Nomascus leucogenys	98.77	0.00e+00	806.00
IUUC-Opr-070192	Ochotona princeps	89.78	0.00e+00	671.00
IUUC-Ont-072539	Oreochromis niloticus	72.17	1.00e-148	519.00
IUUC-Oan-072834	Ornithorhynchus anatinus	61.59	1.00e-112	399.00
IUUC-Ocu-074624	Oryctolagus cuniculus	91.60	0.00e+00	714.00
IUUC-Ola-087268	Oryzias latipes	63.12	3.00e-160	558.00
IUUC-Oga-088964	Otolemur garnettii	87.32	0.00e+00	743.00
IUUC-Oar-090202	Ovis aries	93.52	0.00e+00	752.00
IUUC-Ptr-091164	Pan troglodytes	99.00	0.00e+00	793.00
IUUC-Pan-092805	Papio anubis	97.29	0.00e+00	716.00
IUUC-Psi-093359	Pelodiscus sinensis	80.92	5.00e-163	566.00
IUUC-Pma-094425	Petromyzon marinus	63.24	9.00e-165	573.00
IUUC-Ppa-095677	Physcomitrella patens	46.05	5.00e-81	293.00
IUUC-Pfo-096741	Poecilia formosa	74.32	6.00e-141	493.00
IUUC-Pca-101122	Procavia capensis	89.19	0.00e+00	758.00
IUUC-Pva-103104	Pteropus vampyrus	72.24	2.00e-167	582.00
IUUC-Rno-105282	Rattus norvegicus	87.03	0.00e+00	665.00
IUUC-Sha-106840	Sarcophilus harrisii	79.92	8.00e-117	412.00
IUUC-Smo-109423	Selaginella moellendorffii	44.19	1.00e-77	283.00
IUUC-Sar-113262	Sorex araneus	64.37	1.00e-145	508.00
IUUC-Ssc-115392	Sus scrofa	92.86	0.00e+00	657.00
IUUC-Tgu-117340	Taeniopygia guttata	73.75	2.00e-177	614.00
IUUC-Tsy-119404	Tarsius syrichta	86.53	0.00e+00	723.00
IUUC-Tni-120713	Tetraodon nigroviridis	73.06	2.00e-136	478.00
IUUC-Tbe-127788	Tupaia belangeri	68.06	2.00e-157	548.00
IUUC-Ttr-128608	Tursiops truncatus	89.43	0.00e+00	720.00
IUUC-Xtr-132720	Xenopus tropicalis	62.97	3.00e-159	554.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence