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Tag Content
UUCD2 ID IUUC-Pop-099841
UUCD1 version UUC-PoT-00551
Ensembl Protein ID POPTR_0001s02180.1
UniProt Accession B9GLV7; B9GLV7_POPTR
Genbank Protein ID EEE82528.2
Protein Name Zinc finger family protein
Genbank Nucleotide ID CM000337
Gene Name POPTRDRAFT_590037; POPTR_0001s02180g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s02180 POPTR_0001s02180.1 POPTR_0001s02180.1
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RBR 30.62 1.00e-47 189.00 IUUC-Hsa-046887
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Populus trichocarpa
Protein Sequence
(Fasta)
MRRGKHRIGE SWTVKRLHDH SQHQQKQQQQ EESNLESPSV LSASSQQQYI KKSEHKPSNS 60
QVVSLNSPKS DPPSSSTEVG ASSFGEKVNE NMEKHLHETK KEEIEEKKEE SEPDNGNGVD 120
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Protein Fasta Sequence


>IUUC-Pop-099841|E3,RBR|Populus trichocarpa
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Nucleotide Sequence
(Fasta)
AAAAAAAATC TTCTTTTATT CCCAATCCCT GAAATTTTCA GTCCCTCTCC CTGTAAAAAT 60
TGGCCATGAG AAGAGGTAAG CACCGTATCG GGGAGTCCTG GACTGTTAAA CGACTTCACG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Pop-099841|E3,RBR|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR006575--RWD-domain
IPR016135--UBQ-conjugating_enzyme/RWD
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS50908--RWD
PS00518--ZF_RING_1
Pfam

PF01485--IBR
PF05773--RWD
SMART

SM00647--IBR
SM00184--RING
SM00591--RWD
Gene Ontology

GO:0005737--C:cytoplasm
GO:0000151--C:ubiquitin ligase complex
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
KEGG pop:POPTR_0001s02180g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001130 Aegilops tauschii 51.92 3.00e-151 528.00
IUUC-Aml-001458 Ailuropoda melanoleuca 30.26 1.00e-47 183.00
IUUC-Atr-002560 Amborella trichopoda 59.96 1.00e-173 602.00
IUUC-Apl-003680 Anas platyrhynchos 30.33 7.00e-57 214.00
IUUC-Aca-005000 Anolis carolinensis 31.76 6.00e-52 197.00
IUUC-Aly-006288 Arabidopsis lyrata 62.66 0.00e+00 733.00
IUUC-Ath-006719 Arabidopsis thaliana 62.10 0.00e+00 729.00
IUUC-Acl-008213 Aspergillus clavatus 23.70 8.00e-21 95.10
IUUC-Afl-008433 Aspergillus flavus 25.71 2.00e-22 100.00
IUUC-Afu-008772 Aspergillus fumigatus 22.74 1.00e-20 94.40
IUUC-Ani-009249 Aspergillus nidulans 23.41 3.00e-17 83.20
IUUC-Ang-009757 Aspergillus niger 27.48 8.00e-25 107.00
IUUC-Aor-009963 Aspergillus oryzae 25.29 7.00e-22 98.60
IUUC-Ate-010460 Aspergillus terreus 23.72 2.00e-16 80.50
IUUC-Ame-011312 Astyanax mexicanus 30.13 7.00e-56 210.00
IUUC-Bgr-012052 Blumeria graminis 22.19 9.00e-21 94.70
IUUC-Bta-013529 Bos taurus 31.94 2.00e-50 192.00
IUUC-Bci-013729 Botrytis cinerea 22.67 6.00e-17 82.00
IUUC-Bdi-014940 Brachypodium distachyon 53.93 2.00e-155 542.00
IUUC-Bra-016998 Brassica rapa 63.79 0.00e+00 724.00
IUUC-Cel-018547 Caenorhabditis elegans 25.69 1.00e-28 120.00
IUUC-Cja-019791 Callithrix jacchus 30.84 2.00e-49 189.00
IUUC-Cfa-020403 Canis familiaris 30.55 2.00e-49 189.00
IUUC-Cpo-022229 Cavia porcellus 29.74 2.00e-43 169.00
IUUC-Cre-022601 Chlamydomonas reinhardtii 40.93 2.00e-36 144.00
IUUC-Csa-024115 Chlorocebus sabaeus 30.84 8.00e-50 190.00
IUUC-Cho-024911 Choloepus hoffmanni 31.26 8.00e-50 190.00
IUUC-Cin-025578 Ciona intestinalis 30.02 2.00e-45 176.00
IUUC-Csv-026355 Ciona savignyi 29.78 8.00e-48 183.00
IUUC-Cgl-026439 Colletotrichum gloeosporioides 21.62 6.00e-23 101.00
IUUC-Cne-026782 Cryptococcus neoformans 23.75 8.00e-25 107.00
IUUC-Dre-027380 Danio rerio 30.51 8.00e-56 210.00
IUUC-Dno-029640 Dasypus novemcinctus 31.65 2.00e-50 192.00
IUUC-Dor-030681 Dipodomys ordii 31.49 4.00e-50 191.00
IUUC-Dse-031208 Dothistroma septosporum 21.96 3.00e-18 86.30
IUUC-Ete-033122 Echinops telfairi 29.47 3.00e-43 168.00
IUUC-Eca-033755 Equus caballus 31.06 4.00e-49 188.00
IUUC-Eeu-035034 Erinaceus europaeus 34.97 8.00e-15 74.30
IUUC-Fca-036461 Felis catus 31.04 1.00e-49 190.00
IUUC-Fal-037516 Ficedula albicollis 32.38 1.00e-57 216.00
IUUC-Fox-037923 Fusarium oxysporum 23.40 5.00e-05 42.70
IUUC-Fso-038307 Fusarium solani 22.30 2.00e-19 90.90
IUUC-Gmo-039563 Gadus morhua 29.13 4.00e-53 201.00
IUUC-Ggr-039920 Gaeumannomyces graminis 20.96 2.00e-13 70.90
IUUC-Gga-040331 Gallus gallus 31.72 2.00e-56 212.00
IUUC-Gac-042164 Gasterosteus aculeatus 30.39 4.00e-55 208.00
IUUC-Gma-044080 Glycine max 62.50 0.00e+00 716.00
IUUC-Ggo-045257 Gorilla gorilla 31.28 3.00e-49 188.00
IUUC-Hsa-046887 Homo sapiens 30.62 1.00e-49 189.00
IUUC-Hvu-047317 Hordeum vulgare 46.78 4.00e-131 461.00
IUUC-Itr-048199 Ictidomys tridecemlineatus 31.72 2.00e-49 189.00
IUUC-Lch-050155 Latimeria chalumnae 31.25 5.00e-57 214.00
IUUC-Lpe-051669 Leersia perrieri 54.79 2.00e-143 501.00
IUUC-Loc-051779 Lepisosteus oculatus 28.34 4.00e-50 191.00
IUUC-Lma-052969 Leptosphaeria maculans 22.33 2.00e-19 89.70
IUUC-Laf-053488 Loxodonta africana 31.21 4.00e-55 208.00
IUUC-Mcc-054701 Macaca mulatta 30.84 5.00e-50 191.00
IUUC-Meu-056577 Macropus eugenii 24.29 3.00e-19 89.40
IUUC-Mor-057157 Magnaporthe oryzae 23.63 1.00e-18 88.20
IUUC-Mpo-057518 Magnaporthe poae 21.07 2.00e-16 80.50
IUUC-Mtr-058125 Medicago truncatula 62.55 0.00e+00 674.00
IUUC-Mla-059062 Melampsora laricipopulina 26.67 2.00e-17 82.80
IUUC-Mga-059906 Meleagris gallopavo 31.71 6.00e-57 214.00
IUUC-Mvi-060374 Microbotryum violaceum 26.54 2.00e-17 83.20
IUUC-Mmr-061786 Microcebus murinus 30.82 4.00e-49 188.00
IUUC-Mdo-062453 Monodelphis domestica 29.98 1.00e-54 207.00
IUUC-Mmu-063521 Mus musculus 30.13 2.00e-46 179.00
IUUC-Mac-065119 Musa acuminata 60.89 0.00e+00 652.00
IUUC-Mpu-066274 Mustela putorius furo 30.39 5.00e-50 191.00
IUUC-Mlu-067202 Myotis lucifugus 31.42 8.00e-47 180.00
IUUC-Nfi-068564 Neosartorya fischeri 22.30 3.00e-19 89.70
IUUC-Ncr-068823 Neurospora crassa 21.87 2.00e-18 87.40
IUUC-Nle-068987 Nomascus leucogenys 30.62 2.00e-49 189.00
IUUC-Opr-070453 Ochotona princeps 30.53 1.00e-49 190.00
IUUC-Ont-072611 Oreochromis niloticus 30.17 3.00e-52 199.00
IUUC-Oan-073738 Ornithorhynchus anatinus 30.84 7.00e-55 207.00
IUUC-Ocu-074396 Oryctolagus cuniculus 30.60 4.00e-48 184.00
IUUC-Oba-075472 Oryza barthii 53.53 2.00e-147 515.00
IUUC-Obr-076277 Oryza brachyantha 55.58 3.00e-157 548.00
IUUC-Ogl-077046 Oryza glaberrima 52.70 2.00e-145 508.00
IUUC-Ogu-078634 Oryza glumaepatula 53.73 3.00e-148 518.00
IUUC-Oin-080080 Oryza indica 50.46 3.00e-152 531.00
IUUC-Olo-080828 Oryza longistaminata 50.10 2.00e-139 490.00
IUUC-Ome-081387 Oryza meridionalis 49.54 2.00e-154 538.00
IUUC-Oni-082934 Oryza nivara 52.89 2.00e-142 499.00
IUUC-Opu-083719 Oryza punctata 49.06 1.00e-131 462.00
IUUC-Oru-084518 Oryza rufipogon 53.73 3.00e-148 518.00
IUUC-Ola-087312 Oryzias latipes 29.37 2.00e-51 196.00
IUUC-Olu-087661 Ostreococcus lucimarinus 32.07 2.00e-74 273.00
IUUC-Oga-089129 Otolemur garnettii 31.93 2.00e-49 189.00
IUUC-Oar-089839 Ovis aries 31.94 1.00e-50 193.00
IUUC-Ptr-091626 Pan troglodytes 30.62 2.00e-49 189.00
IUUC-Pan-092798 Papio anubis 30.84 5.00e-50 191.00
IUUC-Psi-093253 Pelodiscus sinensis 31.57 1.00e-58 219.00
IUUC-Pma-094512 Petromyzon marinus 30.80 1.00e-59 223.00
IUUC-Pno-094937 Phaeosphaeria nodorum 23.76 1.00e-24 107.00
IUUC-Ppa-095211 Physcomitrella patens 41.00 8.00e-125 440.00
IUUC-Pfo-097049 Poecilia formosa 29.86 3.00e-50 192.00
IUUC-Pab-097911 Pongo abelii 30.07 9.00e-50 190.00
IUUC-Pca-100814 Procavia capensis 25.78 3.00e-27 115.00
IUUC-Ppe-101972 Prunus persica 73.27 0.00e+00 773.00
IUUC-Pva-103038 Pteropus vampyrus 30.99 3.00e-49 189.00
IUUC-Pgr-103277 Puccinia graminis 25.95 8.00e-25 107.00
IUUC-Ptt-103855 Puccinia triticina 24.61 2.00e-21 96.70
IUUC-Pyt-104619 Pyrenophora triticirepentis 22.28 1.00e-17 83.60
IUUC-Rno-106003 Rattus norvegicus 29.82 2.00e-45 176.00
IUUC-Sce-106287 Saccharomyces cerevisiae 26.10 1.00e-18 87.40
IUUC-Sha-106652 Sarcophilus harrisii 30.62 9.00e-55 207.00
IUUC-Spo-108167 Schizosaccharomyces pombe 24.36 9.00e-23 100.00
IUUC-Smo-109393 Selaginella moellendorffii 41.44 3.00e-103 368.00
IUUC-Sit-110529 Setaria italica 52.21 8.00e-131 460.00
IUUC-Sly-111829 Solanum lycopersicum 67.17 0.00e+00 767.00
IUUC-Stu-112811 Solanum tuberosum 69.25 0.00e+00 790.00
IUUC-Sar-113259 Sorex araneus 28.57 5.00e-23 101.00
IUUC-Sbi-114591 Sorghum bicolor 52.24 9.00e-139 486.00
IUUC-Sre-115227 Sporisorium reilianum 23.01 8.00e-19 88.60
IUUC-Ssc-115293 Sus scrofa 30.87 5.00e-50 191.00
IUUC-Tgu-117335 Taeniopygia guttata 31.35 3.00e-56 212.00
IUUC-Tru-118458 Takifugu rubripes 30.92 4.00e-56 211.00
IUUC-Tsy-119475 Tarsius syrichta 30.84 9.00e-40 157.00
IUUC-Tni-119827 Tetraodon nigroviridis 30.11 4.00e-52 198.00
IUUC-Tca-121023 Theobroma cacao 73.02 0.00e+00 797.00
IUUC-Tre-121965 Trichoderma reesei 23.32 6.00e-23 101.00
IUUC-Tvi-122564 Trichoderma virens 22.76 3.00e-22 99.80
IUUC-Tae-124793 Triticum aestivum 53.89 7.00e-140 490.00
IUUC-Tur-126258 Triticum urartu 47.39 8.00e-120 423.00
IUUC-Ttr-128984 Tursiops truncatus 40.91 3.00e-20 92.40
IUUC-Uma-129565 Ustilago maydis 23.54 5.00e-17 82.40
IUUC-Vpa-130301 Vicugna pacos 30.57 2.00e-49 189.00
IUUC-Vvi-131244 Vitis vinifera 71.69 0.00e+00 811.00
IUUC-Xtr-132880 Xenopus tropicalis 31.55 1.00e-57 216.00
IUUC-Xma-134055 Xiphophorus maculatus 30.22 4.00e-54 204.00
IUUC-Yli-134342 Yarrowia lipolytica 24.65 3.00e-26 112.00
IUUC-Zma-135021 Zea mays 52.06 7.00e-146 510.00
Created Date 25-Jun-2017

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