iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014183

UUCD1 version

UUC-BrD-00836

Ensembl Protein ID

BRADI4G00760.2

UniProt Accession

I1IG46; I1IG46_BRADI

Genbank Protein ID

KQJ85634.1; KQJ85635.1; KQJ85636.1; KQJ85637.1; KQJ85638.1; KQJ85639.1; KQJ85640.1; KQJ85641.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000883; CM000883; CM000883; CM000883; CM000883; CM000883; CM000883; CM000883

Gene Name

LOC100839731; BRADI_4g00760

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI4G00760	BRADI4G00760.2	BRADI4G00760.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.20e-06	26.7	22	76
E3 activity/RING/RING	3.50e-06	28.0	24	65

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwl..asggk..tcPvtrqplteedlvPn 58
           f C I +el+++P v+ +G+ +   ++ kwl   s  +  +cPv+++ ++e++lvP 
   Q: 22   FECNICFELPQEPIVTLCGHLFCWPCLYKWLhiHS--HspECPVCKAVVEEDKLVPL 76
           99*****************************5444..4459**************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e +++ p+v+ CgH+f+  Cl+kw ++    s +  CP+C+
   Q: 24   CNICFELPQE-PIVTLCGHLFCWPCLYKW-LHI--HSHSPECPVCK 65
           99******99.999***************.444..788889****6 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAANVGESTS SSGGAGDGGG SFECNICFEL PQEPIVTLCG HLFCWPCLYK WLHIHSHSPE 60
CPVCKAVVEE DKLVPLYGRG KDRVDPRSKN VPGAEIPHRP TGQRPATAPQ ADPNNHFPNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTAAACAA CTCGTGGTCC CCCTAGTTAC TCTCCGCTTC GTCTTCTTCC TCTAAGCTTC 60
TCCTCTCTCG GCGCGGGAGG CAGGCGCAGC ATCGTCGTCG TCGGTCGCCT CGGCTCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:0016021--C:integral component of membrane
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

bdi:100839731

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002444	Amborella trichopoda	64.29	5.00e-50	189.00
IUUC-Apl-003744	Anas platyrhynchos	53.62	2.00e-20	90.50
IUUC-Aly-006065	Arabidopsis lyrata	66.24	8.00e-52	196.00
IUUC-Ath-007267	Arabidopsis thaliana	65.61	2.00e-51	194.00
IUUC-Ame-011667	Astyanax mexicanus	55.00	4.00e-19	87.00
IUUC-Bol-016132	Brassica oleracea	61.64	1.00e-51	195.00
IUUC-Bra-017631	Brassica rapa	60.87	3.00e-51	194.00
IUUC-Cel-018228	Caenorhabditis elegans	50.00	2.00e-24	105.00
IUUC-Cpo-021347	Cavia porcellus	52.86	1.00e-20	91.70
IUUC-Dre-028094	Danio rerio	52.86	2.00e-20	91.30
IUUC-Dno-029402	Dasypus novemcinctus	52.86	2.00e-20	91.70
IUUC-Ete-032786	Echinops telfairi	52.86	1.00e-20	92.00
IUUC-Fal-037085	Ficedula albicollis	52.86	2.00e-20	91.30
IUUC-Gma-043248	Glycine max	53.55	1.00e-56	211.00
IUUC-Hvu-047043	Hordeum vulgare	87.32	1.00e-82	298.00
IUUC-Lch-050658	Latimeria chalumnae	52.86	2.00e-20	91.30
IUUC-Lpe-050836	Leersia perrieri	84.24	2.00e-78	286.00
IUUC-Mtr-058107	Medicago truncatula	52.07	2.00e-48	184.00
IUUC-Mmr-061662	Microcebus murinus	42.47	3.00e-12	63.90
IUUC-Mac-065053	Musa acuminata	75.82	6.00e-64	236.00
IUUC-Ont-071950	Oreochromis niloticus	51.43	3.00e-20	90.90
IUUC-Oan-073480	Ornithorhynchus anatinus	52.86	2.00e-20	91.70
IUUC-Obr-076736	Oryza brachyantha	85.32	6.00e-89	319.00
IUUC-Ogl-076945	Oryza glaberrima	83.10	4.00e-89	319.00
IUUC-Oin-079606	Oryza indica	82.16	6.00e-88	316.00
IUUC-Olo-080378	Oryza longistaminata	83.10	4.00e-89	319.00
IUUC-Ome-081459	Oryza meridionalis	83.10	7.00e-89	319.00
IUUC-Oni-082738	Oryza nivara	83.10	9.00e-90	322.00
IUUC-Opu-083407	Oryza punctata	92.92	6.00e-90	322.00
IUUC-Osa-086126	Oryza sativa	83.10	4.00e-89	319.00
IUUC-Ppa-095474	Physcomitrella patens	61.64	2.00e-45	174.00
IUUC-Pop-098889	Populus trichocarpa	59.24	1.00e-56	212.00
IUUC-Ppe-102011	Prunus persica	56.40	3.00e-56	210.00
IUUC-Sha-107361	Sarcophilus harrisii	52.86	1.00e-20	92.00
IUUC-Sit-109934	Setaria italica	81.97	2.00e-81	294.00
IUUC-Sly-111255	Solanum lycopersicum	64.86	1.00e-45	175.00
IUUC-Stu-112117	Solanum tuberosum	61.04	3.00e-44	170.00
IUUC-Sar-113669	Sorex araneus	52.17	4.00e-10	55.50
IUUC-Sbi-114116	Sorghum bicolor	82.05	6.00e-88	315.00
IUUC-Tgu-116886	Taeniopygia guttata	52.86	2.00e-20	91.30
IUUC-Tca-121264	Theobroma cacao	66.45	3.00e-55	207.00
IUUC-Tae-124257	Triticum aestivum	82.24	8.00e-82	295.00
IUUC-Tur-126443	Triticum urartu	84.04	6.00e-82	296.00
IUUC-Ttr-129044	Tursiops truncatus	52.86	2.00e-20	91.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence