iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131725

UUCD1 version

UUC-ViV-00016

Ensembl Protein ID

VIT_03s0063g02050.t01

UniProt Accession

A5B286; A5B286_VITVI

Genbank Protein ID

CAN60863.1; CCB56953.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

AM444057; FN596006

Gene Name

VIT_03s0063g02050; VITISV_016726

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_03s0063g02050	VIT_03s0063g02050.t01	VIT_03s0063g02050.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.80e-06	27.1	31	72
E3 activity/RING/U-box	2.70e-06	27.9	28	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e  +d p+v+ CgH+f+  Cl++w ++    s +  CP+C+
   Q: 31   CNICFELAQD-PIVTLCGHLFCWPCLYRW-LHI--HSHSHECPVCK 72
           99********.999***************.444..778888****7 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPn 58
           +f C I +el +dP v+ +G+ +   ++ +wl   s  ++cPv+++ ++ee+lvP 
   Q: 28   DFECNICFELAQDPIVTLCGHLFCWPCLYRWLhiHSHSHECPVCKALVQEEKLVPL 83
           699*****************************77555558**************96 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MESEFGESTS GPSRGPSYTT NNSNDTGDFE CNICFELAQD PIVTLCGHLF CWPCLYRWLH 60
IHSHSHECPV CKALVQEEKL VPLYGRGKTP SDPRSRSVPG INIPNRPAGQ RPEVAPRPDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAAGACTTG TTTGGTTTGA TTGGCTTCCA TTTTTCTATT CCTTTTTTCT CTTCTACCTC 60
TGCCCGTCCC CTCTCTCTCC CTCCCTCTAT ATAGACATTC TCACATTTTG CCCTGTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

vvi:100245178

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018228	Caenorhabditis elegans	43.20	4.00e-28	117.00
IUUC-Cre-022829	Chlamydomonas reinhardtii	53.76	2.00e-25	105.00
IUUC-Cme-027164	Cyanidioschyzon merolae	58.46	7.00e-21	93.20
IUUC-Gma-043248	Glycine max	64.94	6.00e-76	275.00
IUUC-Mtr-058107	Medicago truncatula	58.94	5.00e-64	236.00
IUUC-Ppa-095474	Physcomitrella patens	60.00	6.00e-51	192.00
IUUC-Pop-099595	Populus trichocarpa	62.17	2.00e-75	273.00
IUUC-Ppe-102011	Prunus persica	66.96	1.00e-83	301.00
IUUC-Smo-109663	Selaginella moellendorffii	53.12	2.00e-34	136.00
IUUC-Sly-111255	Solanum lycopersicum	68.90	9.00e-60	222.00
IUUC-Stu-112117	Solanum tuberosum	69.68	6.00e-57	212.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence