iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108230

UUCD1 version

UUC-ScP-00035

Ensembl Protein ID

SPBC1271.01c.1:pep

UniProt Accession

O94334; POF13_SCHPO

Genbank Protein ID

BAB55892.1; CAA22191.1

Protein Name

F-box protein pof13

Genbank Nucleotide ID

AB062275; CU329671

Gene Name

pof13; SPBC1271.01c

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPBC1271.01c	SPBC1271.01c.1	SPBC1271.01c.1:pep

Annotation

mRNA Expression
GEO
Protein Expression/Proteomics

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	15147268

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MRPTHWSSNQ CEVDFTAEAL TTLSLSNRNH EEDPIQPVLK NSNLFLLNRD IWSLIINYLD 60
AFDILRLMHS SRQFYYWLRK SAVDECCFNN NFLNLQPYQR TVPVASDLEW ATEVDLYGNP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAACATGTA TATAAATGTA AATTTGTTAA ACAAACGTTT ATTATATCCT TTTAGTATTC 60
TGTATTTGCT CTTTATAATT TGCTTAATCA AGGTCAACAT TTATCTGGAT AAACAAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like

Gene Ontology

GO:0005829--C:cytosol
GO:0000151--C:ubiquitin ligase complex
GO:0030674--F:protein binding, bridging
GO:0016567--P:protein ubiquitination

KEGG

spo:SPBC1271.01c

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006752	Arabidopsis thaliana	32.65	2.00e-04	38.10
IUUC-Acl-008279	Aspergillus clavatus	32.00	7.90e-02	30.00
IUUC-Afl-008653	Aspergillus flavus	36.51	5.20e-02	29.60
IUUC-Afu-009006	Aspergillus fumigatus	26.43	2.00e-03	35.80
IUUC-Ang-009830	Aspergillus niger	32.05	1.70e-02	31.60
IUUC-Ate-010311	Aspergillus terreus	36.36	2.60e-02	29.60
IUUC-Ame-011420	Astyanax mexicanus	33.33	2.90e-01	28.90
IUUC-Bci-013922	Botrytis cinerea	39.47	3.50e-02	30.80
IUUC-Csv-026170	Ciona savignyi	25.23	1.20e-02	32.30
IUUC-Cme-027331	Cyanidioschyzon merolae	24.85	3.60e-02	30.40
IUUC-Dse-031346	Dothistroma septosporum	24.24	1.20e-02	30.40
IUUC-Fox-037972	Fusarium oxysporum	29.00	1.60e-01	28.50
IUUC-Gga-040239	Gallus gallus	35.09	3.30e-02	30.80
IUUC-Ggo-045385	Gorilla gorilla	24.26	1.10e-02	35.00
IUUC-Hvu-047084	Hordeum vulgare	26.06	1.00e-02	33.10
IUUC-Itr-048198	Ictidomys tridecemlineatus	20.32	4.50e-02	31.60
IUUC-Laf-053541	Loxodonta africana	30.88	1.60e-02	32.70
IUUC-Mcc-054808	Macaca mulatta	24.63	4.00e-03	37.00
IUUC-Mor-057216	Magnaporthe oryzae	39.58	1.60e-01	28.90
IUUC-Mla-058821	Melampsora laricipopulina	29.20	5.00e-02	30.80
IUUC-Mvi-060214	Microbotryum violaceum	33.33	1.50e-02	32.70
IUUC-Mac-065125	Musa acuminata	29.85	1.00e-02	32.30
IUUC-Nfi-068413	Neosartorya fischeri	25.48	5.00e-04	37.40
IUUC-Oin-079915	Oryza indica	29.46	2.50e-02	32.70
IUUC-Oga-089054	Otolemur garnettii	22.75	3.00e-03	35.00
IUUC-Pan-092711	Papio anubis	24.63	3.00e-03	37.40
IUUC-Psi-093607	Pelodiscus sinensis	22.22	6.00e-03	33.90
IUUC-Ppa-096023	Physcomitrella patens	33.80	4.00e-03	35.00
IUUC-Pab-098210	Pongo abelii	23.88	1.00e-03	35.80
IUUC-Pop-098901	Populus trichocarpa	33.33	1.50e-01	29.60
IUUC-Pyt-104710	Pyrenophora triticirepentis	23.91	6.80e-02	30.00
IUUC-Rno-106058	Rattus norvegicus	31.25	1.40e-02	32.30
IUUC-Ssl-108669	Sclerotinia sclerotiorum	32.39	2.60e-01	27.30
IUUC-Stu-112892	Solanum tuberosum	22.00	2.30e-01	27.70
IUUC-Tre-122141	Trichoderma reesei	29.06	8.40e-02	29.60
IUUC-Tvi-122610	Trichoderma virens	22.44	5.70e-02	30.00
IUUC-Tae-123301	Triticum aestivum	35.00	1.60e-02	32.70
IUUC-Vpa-130419	Vicugna pacos	53.57	1.50e-01	28.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence