iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002851

Ensembl Protein ID

ERM95126

UniProt Accession

W1NI32; W1NI32_AMBTC

Genbank Protein ID

ERM95126.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI397501

Gene Name

AMTR_s00009p00259660

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00009p00259660	ERM95126	ERM95126

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.80e-18	64.3	266	302

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvll 36
           gH+  v+ ++f  ++ +vs++ Dg +k+WD+++ +++
   Q: 266  GHARAVSYVRFlGEGSVVSAGVDGCLKLWDISELRVV 302
           8999*******75589**************8776665 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MKNRDHPNSP KQEEEEEEEE EDEEDGKARC EWDFTLSALI SPSHLADYSD TIAAIEFDHS 60
HCFIATAGKA RKIRIYSLST LCGTQENHHQ QNQGQQLRTR HWDHNSAGDF YLCTPAKLSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAAAACA GAGACCACCC CAATAGCCCC AAGCAGGAAG AAGAAGAAGA AGAAGAAGAA 60
GAAGATGAAG AAGACGGCAA GGCGAGATGT GAGTGGGACT TCACCCTCTC CGCACTCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

atr:18423067

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005431	Arabidopsis lyrata	46.51	3.00e-90	323.00
IUUC-Ath-006939	Arabidopsis thaliana	46.25	2.00e-84	304.00
IUUC-Bdi-014616	Brachypodium distachyon	41.87	3.00e-57	214.00
IUUC-Bol-015816	Brassica oleracea	47.01	5.00e-82	296.00
IUUC-Bra-016672	Brassica rapa	46.52	4.00e-87	313.00
IUUC-Ogl-077687	Oryza glaberrima	35.73	5.00e-53	200.00
IUUC-Oin-079632	Oryza indica	35.32	6.00e-52	196.00
IUUC-Ome-081923	Oryza meridionalis	34.84	3.00e-49	187.00
IUUC-Oni-082448	Oryza nivara	35.32	4.00e-52	197.00
IUUC-Opu-083787	Oryza punctata	36.10	5.00e-64	236.00
IUUC-Oru-085278	Oryza rufipogon	34.84	3.00e-49	187.00
IUUC-Ppa-095874	Physcomitrella patens	35.41	4.00e-60	224.00
IUUC-Pop-099510	Populus trichocarpa	45.61	2.00e-96	345.00
IUUC-Ppe-102088	Prunus persica	44.69	2.00e-85	308.00
IUUC-Smo-109171	Selaginella moellendorffii	35.45	3.00e-51	194.00
IUUC-Sly-111536	Solanum lycopersicum	44.47	6.00e-96	342.00
IUUC-Stu-112915	Solanum tuberosum	45.45	8.00e-98	349.00
IUUC-Tca-120952	Theobroma cacao	47.16	7.00e-99	352.00
IUUC-Tae-123036	Triticum aestivum	37.44	4.00e-56	210.00
IUUC-Vvi-131711	Vitis vinifera	45.43	4.00e-90	324.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence