iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000074060.10	ENSMUST00000056745.11	ENSMUSP00000058175.6
ENSMUSG00000074060.10	ENSMUST00000198397.4	ENSMUSP00000143385.1
ENSMUSG00000074060.10	ENSMUST00000198112.1	ENSMUSP00000142894.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
microRNA	TRANSFAC	RepTar	RAID2
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	23319590

Classification

Family	E-value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	0.013	16.7	9	45

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 110  ilveilklldkeellraarvcrrwqelasqkalwktv 146
            +++il++ld+ +ll+aa+v + w+elas++ lw+++
   Q: 9    PMMKILSYLDAYSLLQAAQVNKDWNELASSDVLWRKL 45
           5789*************************9****987 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MAIHLPCLPM MKILSYLDAY SLLQAAQVNK DWNELASSDV LWRKLCQKRW LYCDMDTLQL 60
QGKETWKQFF IDRIWQERAK FRAKAKDFTY KEIPLMCGLF GYACYISGCG LTRKGQDKSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAGAGTCA GTGTGGACTT AGGCCACTGA AGATGGCGAT CCATTTACCT TGTTTGCCGA 60
TGATGAAAAT CCTCTCCTAT CTGGATGCCT ACAGTTTGCT ACAGGCTGCC CAAGTGAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

PROSITE

PS50181--FBOX

Pfam

PF12937--F-box-like

SMART

SM00256--FBOX

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005783--C:endoplasmic reticulum

KEGG

mmu:382105

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002230	Ailuropoda melanoleuca	34.06	7.00e-61	228.00
IUUC-Aca-005353	Anolis carolinensis	29.32	5.00e-47	182.00
IUUC-Ame-011795	Astyanax mexicanus	23.37	4.00e-12	65.90
IUUC-Fca-035518	Felis catus	30.35	3.00e-56	212.00
IUUC-Gmo-038690	Gadus morhua	25.39	6.00e-34	138.00
IUUC-Gma-043301	Glycine max	32.69	2.00e-04	38.90
IUUC-Itr-048699	Ictidomys tridecemlineatus	32.13	8.00e-56	211.00
IUUC-Lch-050362	Latimeria chalumnae	30.18	1.00e-44	174.00
IUUC-Lpe-051216	Leersia perrieri	41.79	7.00e-09	53.10
IUUC-Mdo-062716	Monodelphis domestica	30.07	1.00e-55	210.00
IUUC-Mlu-067483	Myotis lucifugus	29.89	7.00e-53	201.00
IUUC-Obr-076604	Oryza brachyantha	41.43	1.00e-07	48.90
IUUC-Ogl-077760	Oryza glaberrima	40.30	2.00e-08	52.00
IUUC-Ogu-078908	Oryza glumaepatula	40.30	2.00e-08	51.60
IUUC-Oin-079955	Oryza indica	40.30	2.00e-08	52.00
IUUC-Ome-081325	Oryza meridionalis	38.81	2.00e-08	51.20
IUUC-Oru-084201	Oryza rufipogon	40.30	2.00e-08	52.00
IUUC-Osa-086284	Oryza sativa	40.30	1.00e-08	50.80
IUUC-Oar-090297	Ovis aries	33.04	2.00e-64	239.00
IUUC-Psi-093976	Pelodiscus sinensis	27.37	4.00e-14	71.20
IUUC-Ppa-095293	Physcomitrella patens	29.55	5.00e-03	36.20
IUUC-Sha-107001	Sarcophilus harrisii	30.75	2.00e-54	206.00
IUUC-Sit-109751	Setaria italica	38.81	1.00e-07	48.90
IUUC-Sbi-114150	Sorghum bicolor	37.31	7.00e-07	46.20
IUUC-Vvi-131081	Vitis vinifera	33.33	3.00e-05	44.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence