iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114342

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G220400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g026580	Sb10g026580.1	Sb10g026580.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	43.84	2.00e-56	216.00	IUUC-Ath-006968

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MMHHHPQFLL PRLHSPSSSS SSEAVDMDPR VWGRLPQPLV DRVLACLPTP SFLRLRAACR 60
RFCNLIYSSP FLHSHLLLSP HLPFFAFAVP SAGYLLLLDP TRPEAPSWSR LPLPLPAAPG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGCACC ACCACCCTCA GTTCCTGCTT CCGCGCCTCC ACTCGCCGTC GTCGTCCTCC 60
TCGTCTGAGG CGGTGGACAT GGACCCCCGC GTGTGGGGCC GACTGCCGCA GCCGCTGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR011043--Gal_Oxase/kelch_b-propeller
IPR015915--Kelch-typ_b-propeller

PROSITE

PS50181--FBOX

SMART

SM00256--FBOX

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0006355--P:regulation of transcription, DNA-templated
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g026580

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000610	Aegilops tauschii	65.05	4.00e-54	202.00
IUUC-Atr-002850	Amborella trichopoda	43.70	1.00e-73	269.00
IUUC-Aly-006302	Arabidopsis lyrata	39.61	3.00e-73	268.00
IUUC-Ath-006968	Arabidopsis thaliana	40.10	2.00e-73	268.00
IUUC-Bdi-014051	Brachypodium distachyon	66.56	7.00e-83	300.00
IUUC-Bol-015604	Brassica oleracea	38.48	3.00e-70	258.00
IUUC-Bra-017678	Brassica rapa	38.81	4.00e-70	258.00
IUUC-Gma-043918	Glycine max	41.09	3.00e-71	261.00
IUUC-Lpe-050979	Leersia perrieri	73.79	7.00e-128	449.00
IUUC-Mtr-058083	Medicago truncatula	40.19	2.00e-76	278.00
IUUC-Mac-065290	Musa acuminata	48.38	2.00e-76	278.00
IUUC-Oba-075643	Oryza barthii	74.56	5.00e-88	316.00
IUUC-Obr-076079	Oryza brachyantha	87.39	4.00e-94	336.00
IUUC-Ogl-077787	Oryza glaberrima	81.55	5.00e-124	436.00
IUUC-Ogu-078033	Oryza glumaepatula	74.51	2.00e-107	381.00
IUUC-Oin-079846	Oryza indica	84.20	5.00e-132	463.00
IUUC-Ome-081692	Oryza meridionalis	84.60	4.00e-133	466.00
IUUC-Oni-082165	Oryza nivara	80.83	2.00e-111	394.00
IUUC-Opu-083728	Oryza punctata	82.00	3.00e-136	477.00
IUUC-Oru-084676	Oryza rufipogon	84.60	4.00e-133	466.00
IUUC-Osa-085876	Oryza sativa	84.20	2.00e-130	458.00
IUUC-Ppa-095856	Physcomitrella patens	23.89	7.00e-09	54.30
IUUC-Pop-099723	Populus trichocarpa	38.80	8.00e-77	280.00
IUUC-Ppe-101645	Prunus persica	37.79	5.00e-67	247.00
IUUC-Smo-109217	Selaginella moellendorffii	38.52	2.00e-63	235.00
IUUC-Sly-111026	Solanum lycopersicum	41.62	4.00e-75	274.00
IUUC-Stu-111937	Solanum tuberosum	39.76	1.00e-75	275.00
IUUC-Tca-121846	Theobroma cacao	41.69	1.00e-75	275.00
IUUC-Tae-125944	Triticum aestivum	79.62	4.00e-132	463.00
IUUC-Tur-126494	Triticum urartu	20.43	2.00e-10	59.70
IUUC-Vvi-130852	Vitis vinifera	40.34	7.00e-68	250.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence