iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129768

Ensembl Protein ID

EGY15872

UniProt Accession

G2XAD3; G2XAD3_VERDV

Genbank Protein ID

EGY15872.1

Protein Name

SOF1 protein

Genbank Nucleotide ID

DS572709

Gene Name

VDAG_07036

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_07036	EGY15872	EGY15872

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-38	128.5	109	137
UBD/Beta-Prp	1.30e-44	151.7	158	361

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWD 29
           H++ v+++++  d +l+s++ D+tik+WD
   Q: 109  HENIVRSVCWtKDQRLLSAASDKTIKLWD 137
           9999******87799************** PP

UBD/Beta-Prp

   S: 14   tcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdkl 109
           t + ++++++++a++s ++++ ++d+++ ++   +    +  ++++av f++ +  +l+ ++ Dr i ++dl+t+ ++   +  ++   ++s++p +   +
   Q: 158  TGLSMHRSRNVFAASSSSSSVAIYDLERHNAapdVLGWPNSVDTINAVAFNQVETsVLAACGLDRSIVLFDLRTSMPLTRTT-LNFACNAISWNPmEAFNF 257
           56778999***********************7666666778889*******98877********************999988.************66699* PP
   S: 110  vsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq 210
           ++Gs+d  i ++d+++     ++l+ h ++v++v+++p+g+ lvsGs+Drt+rlW+  +g   +    +  ++v s+ f++++k+++sgs+dg v+lw   
   Q: 258  AVGSEDHNIYIFDMRKFDRALNVLKDHVASVMSVEFSPTGQELVSGSYDRTIRLWNRDQGHSRDIYHTKRMQRVFSTMFTPDSKYVLSGSDDGNVRLWRTN 358
           ****************999999****************************************9999777999999999********************998 PP
   S: 211  tge 213
           ++e
   Q: 359  ASE 361
           443 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MKIKALSRSV SEYNPPGTEV VKQPRNLDPG AHPFERAREY TKALNAVKLE RMHAAPFVAE 60
LGQGHVDGVY TMAKDPNSLQ RFASASGDGA VKVFDMTSRD EVWQTKSAHE NIVRSVCWTK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGATCA AAGCTCTTAG TCGGTCGGTG TCCGAGTACA ACCCGCCTGG AACAGAGGTC 60
GTCAAGCAAC CGCGTAACCT CGATCCTGGC GCCCATCCCT TCGAGCGTGC GAGAGAGTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0072686--C:mitotic spindle
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

vda:VDAG_07036

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	40.67	2.00e-95	340.00
IUUC-Atr-002799	Amborella trichopoda	41.09	2.00e-91	327.00
IUUC-Apl-003675	Anas platyrhynchos	44.44	2.00e-95	341.00
IUUC-Aca-004792	Anolis carolinensis	42.35	2.00e-100	357.00
IUUC-Aly-005998	Arabidopsis lyrata	41.42	6.00e-90	322.00
IUUC-Ath-007526	Arabidopsis thaliana	41.19	2.00e-88	317.00
IUUC-Ago-007774	Ashbya gossypii	49.36	2.00e-125	440.00
IUUC-Acl-008024	Aspergillus clavatus	67.71	0.00e+00	646.00
IUUC-Afu-008930	Aspergillus fumigatus	65.81	0.00e+00	640.00
IUUC-Ani-009370	Aspergillus nidulans	67.78	0.00e+00	650.00
IUUC-Ang-009827	Aspergillus niger	68.67	0.00e+00	652.00
IUUC-Aor-010060	Aspergillus oryzae	66.89	0.00e+00	635.00
IUUC-Ate-010434	Aspergillus terreus	66.76	1.00e-152	530.00
IUUC-Ame-011967	Astyanax mexicanus	44.34	4.00e-103	366.00
IUUC-Bgr-011989	Blumeria graminis	70.98	0.00e+00	689.00
IUUC-Bta-013291	Bos taurus	32.60	1.00e-56	212.00
IUUC-Bci-013868	Botrytis cinerea	72.32	0.00e+00	697.00
IUUC-Bdi-014343	Brachypodium distachyon	40.19	1.00e-87	314.00
IUUC-Bol-015740	Brassica oleracea	39.28	3.00e-82	296.00
IUUC-Bra-016689	Brassica rapa	38.61	3.00e-82	296.00
IUUC-Cel-018536	Caenorhabditis elegans	38.42	1.00e-73	268.00
IUUC-Cja-018779	Callithrix jacchus	42.26	2.00e-99	353.00
IUUC-Cfa-020105	Canis familiaris	41.81	1.00e-98	351.00
IUUC-Cpo-021538	Cavia porcellus	43.84	1.00e-96	344.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	46.58	6.00e-42	161.00
IUUC-Csa-023492	Chlorocebus sabaeus	42.26	1.00e-99	355.00
IUUC-Cho-024497	Choloepus hoffmanni	36.34	5.00e-56	209.00
IUUC-Cin-025524	Ciona intestinalis	41.43	2.00e-95	340.00
IUUC-Csv-026197	Ciona savignyi	41.28	2.00e-94	337.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	78.79	0.00e+00	757.00
IUUC-Cne-026840	Cryptococcus neoformans	42.52	2.00e-66	246.00
IUUC-Cme-027111	Cyanidioschyzon merolae	36.51	2.00e-76	278.00
IUUC-Dre-027471	Danio rerio	44.62	4.00e-103	366.00
IUUC-Dno-029790	Dasypus novemcinctus	44.03	4.00e-83	299.00
IUUC-Dor-030971	Dipodomys ordii	34.96	1.00e-64	238.00
IUUC-Dse-031563	Dothistroma septosporum	65.92	0.00e+00	625.00
IUUC-Dme-032161	Drosophila melanogaster	42.32	6.00e-100	355.00
IUUC-Ete-033127	Echinops telfairi	38.63	6.00e-86	310.00
IUUC-Eca-033531	Equus caballus	42.33	2.00e-96	344.00
IUUC-Eeu-034663	Erinaceus europaeus	37.17	1.00e-77	282.00
IUUC-Fca-036258	Felis catus	42.04	4.00e-99	353.00
IUUC-Fal-037456	Ficedula albicollis	43.68	5.00e-98	349.00
IUUC-Fox-038025	Fusarium oxysporum	74.11	0.00e+00	707.00
IUUC-Fso-038344	Fusarium solani	72.99	0.00e+00	655.00
IUUC-Gmo-039643	Gadus morhua	42.60	7.00e-99	352.00
IUUC-Ggr-039816	Gaeumannomyces graminis	68.97	6.00e-180	621.00
IUUC-Gga-040143	Gallus gallus	43.20	2.00e-98	350.00
IUUC-Gac-041665	Gasterosteus aculeatus	44.87	7.00e-104	369.00
IUUC-Gma-043073	Glycine max	41.90	8.00e-90	322.00
IUUC-Ggo-045058	Gorilla gorilla	42.13	3.00e-99	353.00
IUUC-Hsa-046843	Homo sapiens	42.26	3.00e-99	353.00
IUUC-Hvu-047654	Hordeum vulgare	44.36	2.00e-56	210.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	42.48	1.00e-99	355.00
IUUC-Kpa-049232	Komagataella pastoris	51.52	7.00e-132	462.00
IUUC-Lch-050542	Latimeria chalumnae	44.42	3.00e-101	360.00
IUUC-Lpe-051622	Leersia perrieri	39.65	1.00e-86	311.00
IUUC-Loc-052674	Lepisosteus oculatus	41.59	1.00e-97	348.00
IUUC-Lma-053108	Leptosphaeria maculans	64.59	4.00e-178	615.00
IUUC-Laf-053385	Loxodonta africana	42.48	3.00e-97	347.00
IUUC-Mcc-055151	Macaca mulatta	42.04	3.00e-99	353.00
IUUC-Meu-056230	Macropus eugenii	41.47	7.00e-42	162.00
IUUC-Mor-057013	Magnaporthe oryzae	67.63	0.00e+00	624.00
IUUC-Mpo-057530	Magnaporthe poae	69.64	0.00e+00	627.00
IUUC-Mtr-058187	Medicago truncatula	41.15	7.00e-87	312.00
IUUC-Mla-058964	Melampsora laricipopulina	36.33	9.00e-86	308.00
IUUC-Mga-059712	Meleagris gallopavo	44.05	4.00e-96	343.00
IUUC-Mvi-060370	Microbotryum violaceum	40.98	6.00e-64	236.00
IUUC-Mmr-061340	Microcebus murinus	40.53	7.00e-94	336.00
IUUC-Mdo-062978	Monodelphis domestica	43.68	2.00e-104	370.00
IUUC-Mmu-063439	Mus musculus	43.36	5.00e-100	356.00
IUUC-Mac-065129	Musa acuminata	39.17	8.00e-90	322.00
IUUC-Mpu-066548	Mustela putorius furo	40.96	8.00e-76	275.00
IUUC-Mlu-067660	Myotis lucifugus	41.81	1.00e-98	351.00
IUUC-Nfi-068455	Neosartorya fischeri	68.15	0.00e+00	652.00
IUUC-Ncr-068848	Neurospora crassa	62.78	3.00e-172	595.00
IUUC-Nle-069923	Nomascus leucogenys	42.04	8.00e-99	352.00
IUUC-Opr-070279	Ochotona princeps	34.02	9.00e-27	112.00
IUUC-Ont-072234	Oreochromis niloticus	43.71	1.00e-103	368.00
IUUC-Oan-073713	Ornithorhynchus anatinus	39.11	1.00e-32	130.00
IUUC-Ocu-073782	Oryctolagus cuniculus	42.70	3.00e-99	353.00
IUUC-Oba-075161	Oryza barthii	40.31	7.00e-88	315.00
IUUC-Obr-076868	Oryza brachyantha	40.31	7.00e-88	315.00
IUUC-Ogl-077062	Oryza glaberrima	40.31	7.00e-88	315.00
IUUC-Ogu-078308	Oryza glumaepatula	40.31	7.00e-88	315.00
IUUC-Oin-079378	Oryza indica	40.31	7.00e-88	315.00
IUUC-Olo-080638	Oryza longistaminata	38.34	5.00e-78	283.00
IUUC-Oni-082368	Oryza nivara	40.31	7.00e-88	315.00
IUUC-Opu-083628	Oryza punctata	40.31	7.00e-88	315.00
IUUC-Oru-085226	Oryza rufipogon	40.31	2.00e-87	314.00
IUUC-Osa-085368	Oryza sativa	35.56	7.00e-36	142.00
IUUC-Ola-086836	Oryzias latipes	44.40	2.00e-104	370.00
IUUC-Olu-087755	Ostreococcus lucimarinus	40.73	7.00e-92	329.00
IUUC-Oga-088170	Otolemur garnettii	42.04	2.00e-98	350.00
IUUC-Oar-089388	Ovis aries	42.70	3.00e-101	360.00
IUUC-Ptr-090494	Pan troglodytes	42.26	3.00e-99	353.00
IUUC-Pan-091697	Papio anubis	42.26	2.00e-99	354.00
IUUC-Psi-093916	Pelodiscus sinensis	41.20	3.00e-96	343.00
IUUC-Pno-095004	Phaeosphaeria nodorum	62.58	3.00e-170	589.00
IUUC-Ppa-095514	Physcomitrella patens	39.56	5.00e-93	332.00
IUUC-Pfo-097432	Poecilia formosa	44.16	6.00e-103	365.00
IUUC-Pab-098423	Pongo abelii	42.26	9.00e-100	355.00
IUUC-Pop-099649	Populus trichocarpa	39.86	3.00e-91	327.00
IUUC-Pca-100365	Procavia capensis	40.88	3.00e-88	317.00
IUUC-Ppe-101350	Prunus persica	39.95	1.00e-90	325.00
IUUC-Pva-102845	Pteropus vampyrus	42.00	6.00e-98	349.00
IUUC-Pgr-103469	Puccinia graminis	37.18	7.00e-61	226.00
IUUC-Ptt-103980	Puccinia triticina	37.20	8.00e-61	226.00
IUUC-Pte-104111	Pyrenophora teres	63.70	7.00e-166	574.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	63.47	3.00e-165	573.00
IUUC-Rno-105082	Rattus norvegicus	43.14	3.00e-101	360.00
IUUC-Sce-106340	Saccharomyces cerevisiae	49.26	4.00e-127	446.00
IUUC-Sha-106584	Sarcophilus harrisii	41.91	9.00e-102	362.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	52.23	5.00e-120	422.00
IUUC-Spo-108046	Schizosaccharomyces pombe	51.79	1.00e-126	444.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	72.54	0.00e+00	697.00
IUUC-Smo-109548	Selaginella moellendorffii	40.22	4.00e-93	333.00
IUUC-Sit-110242	Setaria italica	39.00	4.00e-86	310.00
IUUC-Sly-111762	Solanum lycopersicum	40.53	8.00e-86	308.00
IUUC-Stu-112156	Solanum tuberosum	40.53	6.00e-86	309.00
IUUC-Sbi-114739	Sorghum bicolor	40.48	7.00e-89	319.00
IUUC-Sre-114951	Sporisorium reilianum	41.07	5.00e-108	382.00
IUUC-Ssc-115510	Sus scrofa	41.81	1.00e-99	354.00
IUUC-Tgu-117234	Taeniopygia guttata	45.06	4.00e-96	343.00
IUUC-Tru-117986	Takifugu rubripes	43.91	3.00e-102	363.00
IUUC-Tsy-119252	Tarsius syrichta	41.94	3.00e-93	333.00
IUUC-Tni-119785	Tetraodon nigroviridis	45.65	1.00e-100	358.00
IUUC-Tca-121222	Theobroma cacao	41.05	7.00e-89	318.00
IUUC-Tre-122243	Trichoderma reesei	72.32	0.00e+00	696.00
IUUC-Tvi-122293	Trichoderma virens	73.88	0.00e+00	710.00
IUUC-Tae-124545	Triticum aestivum	40.19	1.00e-80	291.00
IUUC-Tur-126098	Triticum urartu	38.94	1.00e-76	278.00
IUUC-Tme-127200	Tuber melanosporum	59.20	1.00e-156	544.00
IUUC-Tbe-127568	Tupaia belangeri	39.48	3.00e-43	167.00
IUUC-Ttr-129185	Tursiops truncatus	36.50	8.00e-79	286.00
IUUC-Uma-129353	Ustilago maydis	40.48	2.00e-106	377.00
IUUC-Vpa-130572	Vicugna pacos	42.13	2.00e-99	354.00
IUUC-Vvi-131555	Vitis vinifera	42.04	4.00e-91	326.00
IUUC-Xtr-132263	Xenopus tropicalis	43.13	1.00e-83	301.00
IUUC-Xma-133925	Xiphophorus maculatus	44.16	3.00e-102	363.00
IUUC-Yli-134384	Yarrowia lipolytica	51.40	8.00e-127	445.00
IUUC-Zma-135616	Zea mays	40.86	2.00e-87	314.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence