iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__3098__AT1G29340.1	fgenesh2_kg.1__3098__AT1G29340.1	fgenesh2_kg.1__3098__AT1G29340.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.80e-31	108.7	298	370

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++f+CpIsl+lM+dPv++++G+tydrssI++w+++g+ tcP+t+q l ++ +vPn +l++li +wc ++++
   Q: 298  VPKDFVCPISLDLMTDPVIISTGQTYDRSSIARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGI 370
           8*******************************************************************98875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MASAAIFSSL RRRRSPSLEA FLAPVDLSGV ALVQTLASIS TEVVSCFTSV RFSFQRKNAR 60
SLIRKIEIFV VLFEFLVDSN WGSSRSRRRS SVSESTALLC LKELYLLLYR SKILVDYCAQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAAAACCC CTTCCATGGC CTCAGCGGCG ATATTCTCAT CGTTACGTCG GAGGAGATCG 60
CCGTCTCTGG AAGCATTTCT AGCCCCCGTT GACCTTTCCG GCGTCGCACT TGTTCAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0009814--P:defense response, incompatible interaction

KEGG

aly:ARALYDRAFT_473144

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001129	Aegilops tauschii	47.39	1.00e-134	473.00
IUUC-Ath-007054	Arabidopsis thaliana	95.10	0.00e+00	1265.00
IUUC-Bdi-014675	Brachypodium distachyon	46.08	9.00e-139	486.00
IUUC-Bol-015901	Brassica oleracea	86.33	0.00e+00	1060.00
IUUC-Bra-017296	Brassica rapa	85.71	0.00e+00	1044.00
IUUC-Gma-043020	Glycine max	71.33	0.00e+00	885.00
IUUC-Hvu-047822	Hordeum vulgare	46.08	2.00e-145	509.00
IUUC-Lch-050386	Latimeria chalumnae	35.82	4.00e-09	55.50
IUUC-Lpe-051105	Leersia perrieri	48.89	9.00e-144	503.00
IUUC-Mtr-057764	Medicago truncatula	70.28	0.00e+00	865.00
IUUC-Mac-065609	Musa acuminata	50.86	1.00e-161	562.00
IUUC-Oba-075480	Oryza barthii	49.91	4.00e-136	477.00
IUUC-Obr-076773	Oryza brachyantha	55.88	1.00e-89	322.00
IUUC-Ogl-077156	Oryza glaberrima	47.69	4.00e-145	507.00
IUUC-Ogu-078640	Oryza glumaepatula	47.69	4.00e-145	508.00
IUUC-Oin-079253	Oryza indica	45.61	5.00e-133	467.00
IUUC-Olo-080903	Oryza longistaminata	50.09	1.00e-136	479.00
IUUC-Ome-081982	Oryza meridionalis	47.85	4.00e-146	511.00
IUUC-Oni-082824	Oryza nivara	47.69	4.00e-145	508.00
IUUC-Opu-083758	Oryza punctata	48.09	9.00e-145	506.00
IUUC-Oru-084718	Oryza rufipogon	47.69	4.00e-145	508.00
IUUC-Osa-085662	Oryza sativa	48.64	2.00e-142	498.00
IUUC-Ppa-095502	Physcomitrella patens	40.37	3.00e-110	391.00
IUUC-Pop-099239	Populus trichocarpa	70.97	0.00e+00	895.00
IUUC-Ppe-101890	Prunus persica	72.43	0.00e+00	854.00
IUUC-Smo-109110	Selaginella moellendorffii	39.50	9.00e-110	390.00
IUUC-Sit-110022	Setaria italica	48.03	5.00e-144	504.00
IUUC-Sly-111463	Solanum lycopersicum	68.18	0.00e+00	833.00
IUUC-Stu-111976	Solanum tuberosum	68.04	0.00e+00	834.00
IUUC-Sbi-114100	Sorghum bicolor	48.56	6.00e-147	514.00
IUUC-Tca-121221	Theobroma cacao	74.69	0.00e+00	946.00
IUUC-Tae-124437	Triticum aestivum	46.56	7.00e-146	510.00
IUUC-Tur-126627	Triticum urartu	50.20	7.00e-130	456.00
IUUC-Vvi-131159	Vitis vinifera	67.95	0.00e+00	822.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence