iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002566

Ensembl Protein ID

ERN05392

UniProt Accession

W1P688; W1P688_AMBTC

Genbank Protein ID

ERN05392.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

KI394011

Gene Name

AMTR_s00007p00217990

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00007p00217990	ERN05392	ERN05392

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.10e-32	110.5	274	345

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p++f+CpIsl+lM+dPv+++sG+ty+rssI +w+++g+ tcP+ +q l++++lvPn++lr+li +wc e++
   Q: 274  IPDDFRCPISLDLMHDPVIVASGQTYERSSISRWIEDGHLTCPKSGQVLAHTNLVPNHALRSLIAQWCRERG 345
           79******************************************************************9986 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MALSPLLFQT RKRRPSVGSF ITPSNLSQTA LVQALMLLAQ ELSLYKPLKP LQKRNSSAII 60
RKVKLLTVLF ETLKETQSPL PKTAILCFRE IFIVLERIKA LLDDCNNGSR IWLLMQNEEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCTAT CTCCATTATT ATTCCAGACA AGGAAGAGAA GGCCATCTGT TGGATCCTTT 60
ATTACACCGT CAAATCTCTC TCAAACTGCC CTAGTTCAAG CGCTAATGCT TCTTGCTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

KEGG

atr:18433570

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000493	Aegilops tauschii	47.46	3.00e-68	251.00
IUUC-Aly-005828	Arabidopsis lyrata	43.92	7.00e-129	453.00
IUUC-Ath-007101	Arabidopsis thaliana	45.56	1.00e-132	466.00
IUUC-Bdi-014833	Brachypodium distachyon	43.82	3.00e-89	321.00
IUUC-Bol-015511	Brassica oleracea	44.93	7.00e-142	496.00
IUUC-Bra-017197	Brassica rapa	44.20	1.00e-138	486.00
IUUC-Gma-043020	Glycine max	45.15	2.00e-129	454.00
IUUC-Hvu-047557	Hordeum vulgare	43.65	3.00e-96	345.00
IUUC-Lch-050386	Latimeria chalumnae	33.33	2.00e-09	55.80
IUUC-Lpe-051445	Leersia perrieri	42.03	5.00e-90	324.00
IUUC-Mtr-058241	Medicago truncatula	42.44	5.00e-115	407.00
IUUC-Mac-065033	Musa acuminata	44.40	6.00e-102	363.00
IUUC-Oba-075591	Oryza barthii	43.69	2.00e-96	345.00
IUUC-Obr-076550	Oryza brachyantha	43.07	5.00e-86	311.00
IUUC-Ogl-076947	Oryza glaberrima	43.80	6.00e-97	347.00
IUUC-Ogu-078626	Oryza glumaepatula	43.69	2.00e-96	345.00
IUUC-Oin-080113	Oryza indica	43.69	2.00e-96	345.00
IUUC-Olo-080301	Oryza longistaminata	42.93	3.00e-67	248.00
IUUC-Ome-081924	Oryza meridionalis	43.48	8.00e-98	350.00
IUUC-Oni-082284	Oryza nivara	43.53	3.00e-95	341.00
IUUC-Opu-083971	Oryza punctata	42.70	2.00e-92	332.00
IUUC-Oru-084898	Oryza rufipogon	43.20	3.00e-100	358.00
IUUC-Osa-085986	Oryza sativa	43.52	9.00e-99	353.00
IUUC-Ppa-095502	Physcomitrella patens	44.12	4.00e-128	450.00
IUUC-Pop-099292	Populus trichocarpa	47.11	7.00e-149	519.00
IUUC-Ppe-101643	Prunus persica	47.51	2.00e-145	508.00
IUUC-Smo-108812	Selaginella moellendorffii	44.82	3.00e-131	461.00
IUUC-Sit-110652	Setaria italica	43.40	2.00e-102	365.00
IUUC-Sly-111346	Solanum lycopersicum	46.42	3.00e-146	510.00
IUUC-Stu-112435	Solanum tuberosum	45.92	2.00e-143	501.00
IUUC-Sbi-114567	Sorghum bicolor	42.11	4.00e-95	341.00
IUUC-Tca-121203	Theobroma cacao	47.23	1.00e-148	519.00
IUUC-Tae-124205	Triticum aestivum	42.27	8.00e-85	306.00
IUUC-Vvi-131545	Vitis vinifera	48.07	3.00e-147	514.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence