iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-015901

Ensembl Protein ID

Bo3g144000.1

UniProt Accession

A0A0D3BIU0; A0A0D3BIU0_BRAOL

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo3g144000	Bo3g144000.1	Bo3g144000.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.90e-31	107.9	291	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           vp++f+CpIsl+lM+dPv++++G+tydr+sI++w+++g+ tcP+t+q l ++ +vPn +l++li +wc++++
   Q: 291  VPKDFVCPISLDLMTDPVIISTGQTYDRTSIARWIEEGHCTCPKTGQMLVDSRIVPNRALKNLIVQWCAASG 362
           8*******************************************************************9876 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MATAAIFSSL RRRRSPSLEA FLSPVDLSGL PLVQTLAAIS TEIISSFSGT RFSFQRRNAR 60
SLIRKIEIFL VLFESLAESR WGSTPSSSSS SSSTALLCLK ELYLLLYRSK ILLDYCAHSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTACGG CAGCGATATT CTCATCTCTA CGACGGAGGA GATCGCCGTC ACTGGAAGCC 60
TTTCTATCTC CCGTTGACCT CTCCGGCCTC CCCCTCGTTC AAACCCTAGC CGCAATCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006027	Arabidopsis lyrata	85.79	0.00e+00	1096.00
IUUC-Ath-007054	Arabidopsis thaliana	84.26	0.00e+00	1085.00
IUUC-Bra-017296	Brassica rapa	96.80	0.00e+00	1175.00
IUUC-Oba-075480	Oryza barthii	50.64	7.00e-138	483.00
IUUC-Obr-076773	Oryza brachyantha	54.81	1.00e-82	299.00
IUUC-Olo-080903	Oryza longistaminata	50.64	9.00e-138	483.00
IUUC-Osa-085662	Oryza sativa	48.99	9.00e-144	503.00
IUUC-Ppa-095502	Physcomitrella patens	42.50	3.00e-109	389.00
IUUC-Pop-099239	Populus trichocarpa	69.14	0.00e+00	817.00
IUUC-Ppe-101890	Prunus persica	68.02	0.00e+00	773.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence