iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-073787

UUCD1 version

UUC-OrC-00187

Ensembl Protein ID

ENSOCUP00000004323.2

UniProt Accession

G1SMZ1; G1SMZ1_RABIT

Protein Name

Uncharacterized protein

Gene Name

RNF4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000004998.2	ENSOCUT00000004994.2	ENSOCUP00000004323.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.80e-09	35.8	136	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf......kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++ +       +  +++ CgHvf+ +Cl       +s +++ +CP+Cr
   Q: 136  CPICMDGYseivqnGRLIVSTECGHVFCSQCL------RDSLKNANTCPTCR 181
           ********55553322255788*********9......4559*********8 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

ISTQKTQRKR RGGTANSRQA QKRTREAAST PEISLEAEPI ELVETAGDEI VDLTCESLEP 60
VVVDLTHNDS VVIVDERRRP RRNARRLRQD HADSCVVSSD EEELSRDRDV YVTTHTSRNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTCTACCC AGGTGAGGAC AATTGGGCCT TTTTTGAGAG CCTCTGTAAA AAAACAAATT 60
TATTTATTTG AAAAGTAGAG TTACAGAGAG AAAGATGGCC CAAGTGCTTG GGCCCCTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002206	Ailuropoda melanoleuca	90.72	1.00e-84	305.00
IUUC-Atr-002771	Amborella trichopoda	33.33	4.00e-09	54.70
IUUC-Apl-004120	Anas platyrhynchos	70.98	1.00e-71	261.00
IUUC-Aca-004236	Anolis carolinensis	60.20	2.00e-59	221.00
IUUC-Ame-011555	Astyanax mexicanus	50.62	4.00e-37	147.00
IUUC-Bta-012913	Bos taurus	87.17	6.00e-85	306.00
IUUC-Bdi-014655	Brachypodium distachyon	42.62	1.00e-10	60.10
IUUC-Bol-016418	Brassica oleracea	37.70	5.00e-09	55.10
IUUC-Bra-016890	Brassica rapa	36.84	9.00e-08	49.70
IUUC-Cja-019151	Callithrix jacchus	92.55	6.00e-82	296.00
IUUC-Cfa-020868	Canis familiaris	90.05	4.00e-81	293.00
IUUC-Cpo-022249	Cavia porcellus	83.51	7.00e-73	266.00
IUUC-Csa-024125	Chlorocebus sabaeus	93.58	2.00e-84	304.00
IUUC-Cin-025749	Ciona intestinalis	40.98	1.00e-13	69.70
IUUC-Csv-026318	Ciona savignyi	38.81	3.00e-13	68.20
IUUC-Dre-028145	Danio rerio	43.75	4.00e-33	134.00
IUUC-Dno-029605	Dasypus novemcinctus	92.51	3.00e-92	330.00
IUUC-Dor-030898	Dipodomys ordii	89.53	6.00e-87	313.00
IUUC-Ete-032694	Echinops telfairi	82.35	6.00e-70	256.00
IUUC-Eca-033443	Equus caballus	94.12	1.00e-84	305.00
IUUC-Eeu-034603	Erinaceus europaeus	91.26	2.00e-53	200.00
IUUC-Fca-035507	Felis catus	91.98	7.00e-81	292.00
IUUC-Fal-037382	Ficedula albicollis	69.43	3.00e-65	240.00
IUUC-Gmo-038960	Gadus morhua	71.43	5.00e-19	85.90
IUUC-Gga-040493	Gallus gallus	68.59	1.00e-68	251.00
IUUC-Gac-042194	Gasterosteus aculeatus	50.68	1.00e-36	145.00
IUUC-Ggo-044726	Gorilla gorilla	95.19	2.00e-85	307.00
IUUC-Hsa-046212	Homo sapiens	95.19	2.00e-85	307.00
IUUC-Hvu-047337	Hordeum vulgare	37.70	2.00e-10	59.70
IUUC-Itr-047892	Ictidomys tridecemlineatus	95.21	3.00e-85	306.00
IUUC-Lpe-050920	Leersia perrieri	37.70	3.00e-10	58.20
IUUC-Loc-051907	Lepisosteus oculatus	46.95	3.00e-35	140.00
IUUC-Laf-054145	Loxodonta africana	89.18	2.00e-81	294.00
IUUC-Mcc-055689	Macaca mulatta	94.12	2.00e-84	304.00
IUUC-Meu-056654	Macropus eugenii	47.06	6.00e-41	159.00
IUUC-Mtr-058314	Medicago truncatula	45.45	1.00e-10	58.90
IUUC-Mga-059303	Meleagris gallopavo	69.95	5.00e-71	259.00
IUUC-Mmr-061355	Microcebus murinus	95.19	5.00e-85	306.00
IUUC-Mdo-062968	Monodelphis domestica	67.02	2.00e-68	251.00
IUUC-Mmu-064421	Mus musculus	88.14	9.00e-92	328.00
IUUC-Mac-064573	Musa acuminata	30.69	7.00e-12	64.30
IUUC-Mpu-066522	Mustela putorius furo	93.09	1.00e-84	305.00
IUUC-Mlu-067065	Myotis lucifugus	87.89	3.00e-81	293.00
IUUC-Nle-069198	Nomascus leucogenys	93.58	5.00e-84	303.00
IUUC-Opr-071141	Ochotona princeps	90.37	1.00e-88	318.00
IUUC-Oan-073341	Ornithorhynchus anatinus	64.58	3.00e-35	140.00
IUUC-Oba-075460	Oryza barthii	40.32	4.00e-11	61.60
IUUC-Obr-076349	Oryza brachyantha	37.70	9.00e-10	57.40
IUUC-Ogl-077094	Oryza glaberrima	36.71	2.00e-11	62.40
IUUC-Ogu-078677	Oryza glumaepatula	40.32	4.00e-11	61.60
IUUC-Oin-079992	Oryza indica	36.71	2.00e-11	62.40
IUUC-Olo-080257	Oryza longistaminata	41.94	3.00e-11	62.00
IUUC-Ome-081943	Oryza meridionalis	36.71	2.00e-11	63.20
IUUC-Oni-082671	Oryza nivara	40.32	4.00e-11	61.60
IUUC-Opu-083644	Oryza punctata	40.32	6.00e-11	60.80
IUUC-Oru-084650	Oryza rufipogon	40.32	4.00e-11	61.60
IUUC-Osa-086110	Oryza sativa	36.71	2.00e-11	62.40
IUUC-Ola-086970	Oryzias latipes	42.64	2.00e-34	138.00
IUUC-Olu-087634	Ostreococcus lucimarinus	37.29	3.00e-10	57.80
IUUC-Oga-088242	Otolemur garnettii	95.21	2.00e-94	337.00
IUUC-Oar-089469	Ovis aries	89.36	4.00e-91	327.00
IUUC-Ptr-091254	Pan troglodytes	90.37	1.00e-79	288.00
IUUC-Pan-092919	Papio anubis	94.18	2.00e-85	307.00
IUUC-Psi-093929	Pelodiscus sinensis	70.10	7.00e-69	253.00
IUUC-Pma-094118	Petromyzon marinus	48.28	1.00e-21	93.60
IUUC-Ppa-095567	Physcomitrella patens	44.26	2.00e-11	62.40
IUUC-Pfo-097412	Poecilia formosa	47.20	5.00e-35	140.00
IUUC-Pab-098424	Pongo abelii	95.72	6.00e-86	309.00
IUUC-Pca-100463	Procavia capensis	83.22	2.00e-48	184.00
IUUC-Ppe-101755	Prunus persica	38.71	2.00e-09	54.70
IUUC-Pva-102594	Pteropus vampyrus	88.41	2.00e-58	217.00
IUUC-Rno-105460	Rattus norvegicus	86.22	2.00e-80	291.00
IUUC-Sha-107487	Sarcophilus harrisii	71.20	7.00e-69	252.00
IUUC-Sit-109959	Setaria italica	36.07	4.00e-05	42.40
IUUC-Sar-113601	Sorex araneus	87.17	6.00e-77	279.00
IUUC-Sbi-114398	Sorghum bicolor	36.07	1.00e-04	40.00
IUUC-Ssc-115911	Sus scrofa	91.98	2.00e-82	298.00
IUUC-Tgu-117264	Taeniopygia guttata	70.16	2.00e-63	234.00
IUUC-Tru-117663	Takifugu rubripes	47.90	1.00e-37	148.00
IUUC-Tsy-118883	Tarsius syrichta	86.49	2.00e-65	240.00
IUUC-Tae-123990	Triticum aestivum	37.10	1.00e-06	46.20
IUUC-Tur-126408	Triticum urartu	39.34	2.00e-10	59.70
IUUC-Ttr-128950	Tursiops truncatus	64.77	6.00e-65	239.00
IUUC-Xtr-132879	Xenopus tropicalis	57.96	3.00e-39	154.00
IUUC-Xma-133319	Xiphophorus maculatus	46.26	3.00e-32	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence