iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099996

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Kelch repeat-containing F-box family protein

Genbank Nucleotide ID

CM000354

Gene Name

POPTRDRAFT_825819; POPTR_0018s03590g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0018s03590	POPTR_0018s03590.1	POPTR_0018s03590.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	54.12	4.00e-114	408.00	IUUC-Ath-007206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MADLSENQEK TEEKHVEPLI PGLPDEVAEL CLLYLPYPYQ ALVRSVSSSW NRAITDPAFL 60
VSKKTLSLAL PHVFVLAFHK STARIQWQAL DPRSGRWFVL PPMPCPKTVC PPAFACTSLP 120

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Nucleotide Sequence
(Fasta)

CAGCGCCATG ATAGCTGGGC CACCCACACT AATTATTAAA GCTAAAAAAA ACACTAACCC 60
CACTCTCGGT GGTTGCATCT CATAGTTGGC CAGAGCAAAC CAAACCATTA ATCCCACAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller
IPR006652--Kelch_1

Pfam

PF00646--F-box
PF01344--Kelch_1

SMART

SM00256--FBOX
SM00612--Kelch

KEGG

pop:POPTR_0018s03590g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005884	Arabidopsis lyrata	55.22	3.00e-121	427.00
IUUC-Ath-007206	Arabidopsis thaliana	54.95	4.00e-120	424.00
IUUC-Bol-015710	Brassica oleracea	56.56	5.00e-123	433.00
IUUC-Bra-017373	Brassica rapa	57.34	3.00e-120	424.00
IUUC-Eeu-034796	Erinaceus europaeus	27.27	2.00e-11	63.50
IUUC-Gma-043190	Glycine max	52.37	3.00e-109	387.00
IUUC-Mtr-058413	Medicago truncatula	50.28	1.00e-94	338.00
IUUC-Mac-064614	Musa acuminata	50.68	3.00e-75	274.00
IUUC-Ppa-095249	Physcomitrella patens	25.58	2.00e-25	109.00
IUUC-Ppe-101313	Prunus persica	64.29	4.00e-103	366.00
IUUC-Tca-121019	Theobroma cacao	74.79	9.00e-173	598.00
IUUC-Tme-126968	Tuber melanosporum	43.90	4.00e-04	38.50
IUUC-Tbe-127407	Tupaia belangeri	26.88	2.00e-12	66.60
IUUC-Vvi-131208	Vitis vinifera	64.82	2.00e-127	448.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence