iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017190

Ensembl Protein ID

Bra013613.1-P

UniProt Accession

M4DAV3; M4DAV3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra013613	Bra013613.1	Bra013613.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.60e-41	141.9	194	500

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsgyeqqDaq 93
           +Gl+N++ t ++N ++Q+L+ +++lr+++l   +e+ +     + k +l++ + +l +++w   + k++vsp+e+l+a+ k++++ f+  +q D  
   Q: 194  VGLNNIQKTEFVNVTIQSLMRVTPLRNFFLI--PENYQ-----HCKSTLVHRFGELTRKIWhaRNFKGQVSPHEFLQAVMKASKKrFRIGQQSDPV 282
           6******************************..55554.....45679*************999999**********998888777********** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.... 185
           Ef+++ll++l+ +l                         ++ k  +s+i++ Fqg+l+     +  +n+  ++ pfl l l++p     k      
   Q: 283  EFMSWLLNTLHMDL-------------------------RTSKDASSIIHQCFQGELEVVREYQGNENKEISRMPFLMLGLDLPPPPLFKDVmekn 353
           **************.........................678999***************************************555332222222 PP
   S: 186  .....slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldlspfcts...peekq 272
                 l d+L++f  e   e           + + a+ + +++k P++L++h+ Rf  ++++ ++ek+ + v+fp + ++l+ +  s     e++
   Q: 354  iipqvALFDLLKKFDGETVTE---------VVRPRLARMRYRVTKSPPYLMFHMVRF--KKNNFFKEKNPTLVNFPVKdMELRDYIPSlptAAEGE 438
           233334555555544444443.........4445558999*****************..88999************999****7766654444555 PP
   S: 273  kekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYk 336
           k+++kY+Lia +vH G+++ G + ++v+ ++++ W+++ D +V e+  + v+    s+aY+ +Y+
   Q: 439  KTCTKYNLIANIVHDGKPEDGYFRVFVQRKSQElWYEMQDLHVAETLPQMVEL---SEAYMQIYE 500
           66***************************88889*******************...********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MKSEREVKNG GVEEERDAKR KRVIERSNDH DVEEAENEQK KDNGVAELDD NEDDDADASK 60
GGKRSRRVEV RRDCPYLDTV NRQVLDFDFE RFCSVSLSNL NVYACLVCGK YFQGRSQKSH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGAGCG AGAGAGAAGT TAAGAACGGT GGTGTTGAGG AAGAGAGAGA TGCGAAGCGG 60
AAGAGAGTGA TAGAGCGATC TAATGATCAC GATGTCGAGG AAGCGGAGAA CGAGCAGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0000245--P:spliceosomal complex assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002758	Amborella trichopoda	77.45	0.00e+00	716.00
IUUC-Acl-008304	Aspergillus clavatus	43.97	6.00e-90	324.00
IUUC-Afl-008735	Aspergillus flavus	53.57	1.00e-42	167.00
IUUC-Afu-009100	Aspergillus fumigatus	43.22	1.00e-86	313.00
IUUC-Ani-009138	Aspergillus nidulans	44.47	5.00e-93	334.00
IUUC-Ang-009661	Aspergillus niger	41.54	1.00e-92	333.00
IUUC-Aor-010235	Aspergillus oryzae	38.84	6.00e-80	291.00
IUUC-Ate-010346	Aspergillus terreus	36.64	1.00e-69	257.00
IUUC-Bgr-011998	Blumeria graminis	43.99	8.00e-100	357.00
IUUC-Bol-016317	Brassica oleracea	94.52	0.00e+00	899.00
IUUC-Cel-018491	Caenorhabditis elegans	44.54	3.00e-110	392.00
IUUC-Cja-019134	Callithrix jacchus	49.68	8.00e-124	437.00
IUUC-Cin-025473	Ciona intestinalis	49.07	1.00e-38	152.00
IUUC-Fox-037895	Fusarium oxysporum	44.57	7.00e-104	370.00
IUUC-Fso-038450	Fusarium solani	45.08	7.00e-103	367.00
IUUC-Ggr-040115	Gaeumannomyces graminis	40.25	2.00e-95	342.00
IUUC-Gma-043697	Glycine max	78.59	0.00e+00	729.00
IUUC-Lpe-051593	Leersia perrieri	77.39	0.00e+00	704.00
IUUC-Mor-057078	Magnaporthe oryzae	44.62	7.00e-97	347.00
IUUC-Mpo-057607	Magnaporthe poae	35.59	1.00e-75	276.00
IUUC-Mtr-058644	Medicago truncatula	80.45	0.00e+00	723.00
IUUC-Mvi-060429	Microbotryum violaceum	53.91	1.00e-74	273.00
IUUC-Nfi-068274	Neosartorya fischeri	43.72	3.00e-88	318.00
IUUC-Ncr-068829	Neurospora crassa	46.30	1.00e-102	366.00
IUUC-Oba-075886	Oryza barthii	76.74	0.00e+00	702.00
IUUC-Ogl-077682	Oryza glaberrima	76.74	0.00e+00	704.00
IUUC-Ogu-078492	Oryza glumaepatula	76.74	0.00e+00	702.00
IUUC-Ome-081573	Oryza meridionalis	76.74	0.00e+00	704.00
IUUC-Opu-083724	Oryza punctata	77.17	0.00e+00	705.00
IUUC-Oru-084566	Oryza rufipogon	76.96	0.00e+00	704.00
IUUC-Osa-086008	Oryza sativa	76.96	0.00e+00	705.00
IUUC-Pan-091812	Papio anubis	49.68	6.00e-124	437.00
IUUC-Psi-093507	Pelodiscus sinensis	46.83	5.00e-60	224.00
IUUC-Ppa-095995	Physcomitrella patens	75.11	0.00e+00	701.00
IUUC-Pop-099158	Populus trichocarpa	80.27	0.00e+00	694.00
IUUC-Ppe-101699	Prunus persica	79.27	0.00e+00	720.00
IUUC-Smo-108892	Selaginella moellendorffii	80.14	0.00e+00	701.00
IUUC-Sly-111308	Solanum lycopersicum	68.77	0.00e+00	731.00
IUUC-Stu-112447	Solanum tuberosum	68.95	0.00e+00	734.00
IUUC-Sre-115059	Sporisorium reilianum	49.61	4.00e-72	265.00
IUUC-Tca-121294	Theobroma cacao	79.53	0.00e+00	746.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence