iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044069

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000837

Gene Name

LOC100795674; GLYMA_04G091700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA04G09730	GLYMA04G09730.3	GLYMA04G09730.3
GLYMA04G09730	GLYMA04G09730.4	GLYMA04G09730.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.60e-76	259.3	603	907

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaq 93
           +Gl N gN+CY N+vLQcL+++p+l+ +ll+ ++++++++     +k ++++++++l+ +  k++k+avsp  ++++l+++ +++ + +++Da+
   Q: 603  FGLINCGNSCYANAVLQCLAFTPPLTAYLLQgSHSKSCAN-----KKWCFTCEFERLILKS-KDTKSAVSPMGIISHLQNIGSQLANGREEDAH 690
           6******************************666666654.....578**********888.9999**************************** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkesl 187
           Efl++++d++++ +        +e+           +     ++ ++l+ ++F+g l s+ikc +c+ +s+r+e ++dl+++++g+ +    +l
   Q: 691  EFLRHVIDTMQSVC-------LMEA---------GVNALGSLEEDTTLMGQTFGGYLLSKIKCMRCGGKSERQERMMDLTVEIEGEIT----TL 764
           **************.......2222.........233466778899****************************************95....8* PP
   S: 188  qdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLi 281
            ++L+ ft++e+l+genky+c +ck++ +a+kkl++++ P+vL++ LkRf   ++ ++  k+nk ++fp+ L+l+pf++ +++k   + +Y+L+
   Q: 765  VEALRRFTSTETLDGENKYHCVRCKSYEKAKKKLTVSEAPNVLTVALKRF---QS-GKFGKLNKPIQFPEILNLAPFMSGTSDK---SPIYRLY 851
           **************************************************...33.4557********************6655...79***** PP
   S: 282  avvvHsG...slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +vvvH      + sGHYv+yvkn ++kW+++dDs Vt+v+ ++vl+   + aY+lfY r
   Q: 852  GVVVHLDimnAAFSGHYVCYVKNIQNKWFKVDDSVVTAVELDRVLT---KGAYMLFYAR 907
           *****873325569********************************...********87 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MRVTGDLGFS SLVLVVVCVV LPVIGFVIRR KWQVSEARKD EIKRLLVLAA EETARAEKEA 60
SYEYGTAVSA APSNLCAVCY FPATARCAQC KSVRYCSFEC QTVHWRQGHK LECRPPSTTC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATTTATCGA GGGCAAAAAA AATTGGTTTC CCTGGACAAA CGCTCACTCA CACCAACCAT 60
CAATTTTTAT TAAATGGCAC CCTCTTTATT TACATTTACC GCGTTTTCTT TTGTTTTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002920	Amborella trichopoda	67.36	1.00e-158	553.00
IUUC-Aly-005811	Arabidopsis lyrata	40.55	2.00e-174	606.00
IUUC-Ath-006972	Arabidopsis thaliana	57.56	7.00e-145	508.00
IUUC-Bol-015264	Brassica oleracea	60.72	6.00e-153	535.00
IUUC-Oba-075877	Oryza barthii	60.51	7.00e-140	491.00
IUUC-Ogu-078675	Oryza glumaepatula	60.67	1.00e-140	493.00
IUUC-Olo-080489	Oryza longistaminata	58.71	3.00e-137	482.00
IUUC-Opu-084076	Oryza punctata	53.80	1.00e-139	490.00
IUUC-Pop-099860	Populus trichocarpa	51.05	0.00e+00	780.00
IUUC-Ppe-101801	Prunus persica	53.89	0.00e+00	842.00
IUUC-Sly-111806	Solanum lycopersicum	66.95	8.00e-171	594.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence