iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058629

Ensembl Protein ID

KEH35732

UniProt Accession

A0A072V1L7; A0A072V1L7_MEDTR

Genbank Protein ID

KEH35732.1

Protein Name

Ubiquitin carboxy-terminal hydrolase

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g100480

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g100480	AES73180	AES73180
MTR_3g100480	KEH35732	KEH35732

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	6.40e-73	247.3	584	918

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEflafll 100
           +Gl N+gN+CY N+vLQcL+++p+l  +l +  ++++++     +++ ++++++++l+ +  k++k+  sp+ +l++l+++ +++ + +++Da+Efl++ +
   Q: 584  FGLINIGNSCYANAVLQCLAFTPPLSAYLVQgLHSKSCS-----NKTWCFICEFERLIFKS-KDTKSPLSPTGILSQLQSIGSQLGNGKEEDAHEFLRHAI 678
           6******************************55555555.....5678**********888.99999********************************** PP
   S: 101  dqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeele 201
           d++++ +          ++         ++ +   ++ ++l+ ++F+g l+s+ikc +c+ +s+r+e ++dl+++++g+ +    +l ++L+ ft++e+l+
   Q: 679  DTMQSVC----------LM------EAGINASGSSEEDTTLMGQTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGEIS----TLAEALRRFTSTETLD 759
           *******..........22......22355677888999****************************************96....7*************** PP
   S: 202  genkyycekckkkqeaekklklkklPevLilhLkRf..........................sfseeqksrekinkkvefpleLdlspfctspeekqkekk 276
           genky+c +ck++q+a+kkl++++ P++L++ LkRf                          sf ++ ++  k+nk v+fp+ Ldl+pf++ +++k   + 
   Q: 760  GENKYHCVRCKSYQKAKKKLTVSEAPNILTVALKRFqvfhtlnyklryyylhflqsvyveftSFVSQSGKFGKLNKPVQFPEILDLAPFVSGTSDK---TP 857
           ***********************************************************9999999999999********************6554...8* PP
   S: 277  kYeLiavvvHsGsls...sGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +Y+L++vvvH   ++   sGHYv+y kn ++kW+++dDs Vt+v+ e+vl+   + aY+lfY r
   Q: 858  IYRLYGVVVHLDVMNasfSGHYVCYLKNIQNKWFKVDDSVVTAVELERVLT---KGAYMLFYAR 918
           **********884433349********************************...********87 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MRVTGDLGFR SLVLVVVCVV VPVIGFVIRR KWQIAVARNE EIKRLLILAA EETARVERET 60
LYSSGAVVSA TNNYQCALCY FPATARCAKC KSVRYCSTGC QTVHWHQGHK FDCRPPSKTH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGTGTCA CCGGGGATCT AGGGTTTAGG AGCCTGGTCC TTGTGGTGGT TTGTGTGGTG 60
GTTCCGGTGA TCGGATTTGT AATTCGTCGG AAATGGCAAA TTGCGGTGGC TAGAAATGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS01360--ZF_MYND_1
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000401	Aegilops tauschii	55.99	5.00e-136	478.00
IUUC-Aly-005811	Arabidopsis lyrata	43.77	6.00e-150	524.00
IUUC-Ath-006972	Arabidopsis thaliana	55.30	3.00e-147	515.00
IUUC-Bdi-014317	Brachypodium distachyon	49.20	2.00e-141	496.00
IUUC-Bol-015264	Brassica oleracea	57.12	1.00e-148	520.00
IUUC-Bra-018079	Brassica rapa	41.85	5.00e-167	581.00
IUUC-Gma-043905	Glycine max	69.66	0.00e+00	1267.00
IUUC-Hvu-047748	Hordeum vulgare	55.48	4.00e-136	478.00
IUUC-Lpe-051561	Leersia perrieri	56.34	2.00e-133	469.00
IUUC-Mac-065141	Musa acuminata	55.28	1.00e-151	530.00
IUUC-Oba-075877	Oryza barthii	54.75	6.00e-137	481.00
IUUC-Obr-076357	Oryza brachyantha	50.98	3.00e-140	491.00
IUUC-Ogl-077565	Oryza glaberrima	53.17	1.00e-133	470.00
IUUC-Ogu-078675	Oryza glumaepatula	57.95	2.00e-136	479.00
IUUC-Oin-079111	Oryza indica	56.41	3.00e-139	489.00
IUUC-Olo-080489	Oryza longistaminata	53.30	5.00e-134	471.00
IUUC-Ome-081510	Oryza meridionalis	54.88	1.00e-136	480.00
IUUC-Oni-082699	Oryza nivara	54.88	3.00e-136	479.00
IUUC-Opu-083249	Oryza punctata	54.40	3.00e-135	475.00
IUUC-Oru-084225	Oryza rufipogon	54.88	1.00e-136	479.00
IUUC-Osa-085297	Oryza sativa	53.17	2.00e-133	469.00
IUUC-Pop-099860	Populus trichocarpa	49.57	0.00e+00	775.00
IUUC-Ppe-101801	Prunus persica	52.37	0.00e+00	803.00
IUUC-Sit-110237	Setaria italica	55.90	6.00e-136	478.00
IUUC-Tca-121756	Theobroma cacao	49.01	0.00e+00	784.00
IUUC-Tae-124405	Triticum aestivum	60.00	3.00e-137	482.00
IUUC-Tur-126154	Triticum urartu	60.00	2.00e-137	482.00
IUUC-Vvi-130946	Vitis vinifera	47.47	0.00e+00	823.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence