iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114436

Ensembl Protein ID

Sb04g023550.1

UniProt Accession

C5XVL3; C5XVL3_SORBI

Genbank Protein ID

EES07014.1; KXG30477.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763; CM000763

Gene Name

SORBI_004G187100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g023550	Sb04g023550.1	Sb04g023550.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/BCR/BTB_Other	57.20	0.00e+00	767.00	IUUC-Ath-006997

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MWESESESHA GERGLVPVGG GSSGRHEALK NDGFVRRDQS WYVNSDIPSD LLVKVGDVSF 60
HLHKYPMISR SGRMSRAIYE TAASSSSTDP AAAGDTAAAA VVVDLHDVPG GAGSFELAAR 120

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Nucleotide Sequence
(Fasta)

ATGTGGGAGT CGGAGAGCGA GAGCCATGCC GGCGAGCGCG GGCTCGTCCC CGTCGGCGGC 60
GGCTCGTCGG GACGGCACGA GGCGCTCAAG AATGACGGCT TCGTTCGGAG AGACCAGTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029959--NPH3-like
IPR027356--NPH3_dom
IPR011333--SKP1/BTB/POZ

PROSITE

PS51649--NPH3

Pfam

PF03000--NPH3

Gene Ontology

GO:0016567--P:protein ubiquitination

KEGG

sbi:SORBI_04g023550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000650	Aegilops tauschii	69.38	4.00e-121	426.00
IUUC-Atr-002432	Amborella trichopoda	59.70	0.00e+00	842.00
IUUC-Aly-005751	Arabidopsis lyrata	33.09	3.00e-79	288.00
IUUC-Ath-006997	Arabidopsis thaliana	56.71	0.00e+00	809.00
IUUC-Bdi-014840	Brachypodium distachyon	73.64	0.00e+00	991.00
IUUC-Bol-015226	Brassica oleracea	57.05	0.00e+00	800.00
IUUC-Bra-017896	Brassica rapa	57.05	0.00e+00	797.00
IUUC-Cne-027089	Cryptococcus neoformans	35.71	2.90e+00	26.20
IUUC-Gma-043945	Glycine max	58.73	0.00e+00	818.00
IUUC-Hvu-047460	Hordeum vulgare	71.24	4.00e-160	556.00
IUUC-Lpe-051121	Leersia perrieri	74.12	0.00e+00	871.00
IUUC-Mtr-058304	Medicago truncatula	57.51	0.00e+00	823.00
IUUC-Mac-064562	Musa acuminata	53.67	0.00e+00	695.00
IUUC-Oba-075302	Oryza barthii	73.39	6.00e-149	520.00
IUUC-Ogl-077256	Oryza glaberrima	73.14	0.00e+00	873.00
IUUC-Ogu-078733	Oryza glumaepatula	73.20	0.00e+00	828.00
IUUC-Oin-079386	Oryza indica	74.42	0.00e+00	851.00
IUUC-Ome-081226	Oryza meridionalis	74.55	0.00e+00	884.00
IUUC-Oni-083044	Oryza nivara	74.42	0.00e+00	851.00
IUUC-Opu-083760	Oryza punctata	71.48	0.00e+00	869.00
IUUC-Oru-084799	Oryza rufipogon	73.00	0.00e+00	825.00
IUUC-Osa-086084	Oryza sativa	74.29	0.00e+00	851.00
IUUC-Pma-094367	Petromyzon marinus	28.57	1.80e+00	26.90
IUUC-Ppa-095360	Physcomitrella patens	41.25	4.00e-135	474.00
IUUC-Pop-099008	Populus trichocarpa	60.15	0.00e+00	865.00
IUUC-Ppe-101588	Prunus persica	58.83	0.00e+00	838.00
IUUC-Smo-108896	Selaginella moellendorffii	44.16	5.00e-159	553.00
IUUC-Sit-109711	Setaria italica	76.79	0.00e+00	1008.00
IUUC-Sly-110943	Solanum lycopersicum	57.98	0.00e+00	823.00
IUUC-Stu-112832	Solanum tuberosum	58.42	0.00e+00	826.00
IUUC-Tca-121395	Theobroma cacao	60.73	0.00e+00	838.00
IUUC-Tae-124007	Triticum aestivum	71.54	0.00e+00	965.00
IUUC-Vvi-131223	Vitis vinifera	59.11	0.00e+00	863.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence