iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088235

Ensembl Protein ID

ENSOGAP00000002195.2

UniProt Accession

H0WKR9; H0WKR9_OTOGA

Genbank Protein ID

ENSOGAP00000002195

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03102600

Gene Name

LDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000002455.2	ENSOGAT00000002458.2	ENSOGAP00000002195.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	62.65	7.00e-123	437.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MSSTPHDPFY SSPFGPFYRR HTPYVVQPEY RIYEMNKRLQ SRSEDSDNLW WDAFATEFFE 60
DDATLTLSFC LEDGPKRYTI GRTLIPRYFS TVFEGGVTDL YYILKHSKES YHNSSITVDC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCCCGACAA GCAGGCAAGA TGTCCAGCAC ACCGCATGAC CCCTTCTATT CATCTCCTTT 60
CGGCCCATTT TATAGGAGAC ACACACCGTA TGTGGTACAG CCAGAGTACC GCATCTATGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0031252--C:cell leading edge
GO:0005730--C:nucleolus
GO:0005886--C:plasma membrane
GO:0005667--C:transcription factor complex
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0010669--P:epithelial structure maintenance
GO:0001942--P:hair follicle development
GO:0044089--P:positive regulation of cellular component biogenesis
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0043549--P:regulation of kinase activity
GO:0035019--P:somatic stem cell population maintenance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	23.84	1.00e-03	38.90
IUUC-Aml-002031	Ailuropoda melanoleuca	75.81	9.00e-149	520.00
IUUC-Atr-003083	Amborella trichopoda	21.39	3.00e-04	41.20
IUUC-Apl-004210	Anas platyrhynchos	75.81	1.00e-119	422.00
IUUC-Aca-005241	Anolis carolinensis	78.04	4.00e-155	540.00
IUUC-Aly-006204	Arabidopsis lyrata	24.40	2.00e-06	47.80
IUUC-Ath-007339	Arabidopsis thaliana	24.40	2.00e-06	47.80
IUUC-Ame-010910	Astyanax mexicanus	72.35	2.00e-149	521.00
IUUC-Bgr-012180	Blumeria graminis	20.55	1.00e-06	48.50
IUUC-Bta-012596	Bos taurus	96.25	0.00e+00	667.00
IUUC-Bci-013927	Botrytis cinerea	29.17	5.00e-09	56.60
IUUC-Bol-015721	Brassica oleracea	24.40	1.00e-06	48.90
IUUC-Bra-017183	Brassica rapa	24.40	9.00e-07	48.90
IUUC-Cel-018189	Caenorhabditis elegans	34.21	2.00e-29	123.00
IUUC-Cja-019586	Callithrix jacchus	97.86	0.00e+00	689.00
IUUC-Cfa-021188	Canis familiaris	75.81	2.00e-148	518.00
IUUC-Cpo-022350	Cavia porcellus	76.85	1.00e-151	529.00
IUUC-Csa-023816	Chlorocebus sabaeus	77.15	3.00e-153	534.00
IUUC-Cho-024958	Choloepus hoffmanni	79.61	8.00e-93	333.00
IUUC-Cin-025721	Ciona intestinalis	51.86	2.00e-92	332.00
IUUC-Csv-026065	Ciona savignyi	55.42	3.00e-96	344.00
IUUC-Dre-027356	Danio rerio	82.05	8.00e-180	622.00
IUUC-Dno-029918	Dasypus novemcinctus	76.44	1.00e-146	512.00
IUUC-Dor-030634	Dipodomys ordii	76.85	8.00e-153	533.00
IUUC-Dse-031245	Dothistroma septosporum	25.00	5.00e-04	40.00
IUUC-Dme-031667	Drosophila melanogaster	61.99	2.00e-123	436.00
IUUC-Ete-032246	Echinops telfairi	94.64	0.00e+00	658.00
IUUC-Eca-034015	Equus caballus	98.12	0.00e+00	692.00
IUUC-Eeu-034902	Erinaceus europaeus	76.85	8.00e-153	533.00
IUUC-Fca-035903	Felis catus	76.40	3.00e-151	528.00
IUUC-Fal-037407	Ficedula albicollis	96.51	0.00e+00	654.00
IUUC-Gmo-039466	Gadus morhua	75.42	3.00e-158	551.00
IUUC-Ggr-040030	Gaeumannomyces graminis	23.98	3.00e-05	44.30
IUUC-Gga-040214	Gallus gallus	77.45	3.00e-152	531.00
IUUC-Gac-042214	Gasterosteus aculeatus	74.52	1.00e-158	552.00
IUUC-Gma-042794	Glycine max	23.94	3.00e-08	53.90
IUUC-Ggo-044988	Gorilla gorilla	97.86	0.00e+00	695.00
IUUC-Hsa-046092	Homo sapiens	97.59	0.00e+00	684.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	76.85	9.00e-153	533.00
IUUC-Lch-049895	Latimeria chalumnae	86.75	4.00e-107	380.00
IUUC-Lpe-050806	Leersia perrieri	26.76	5.00e-05	43.50
IUUC-Loc-052845	Lepisosteus oculatus	76.82	3.00e-155	541.00
IUUC-Lma-053090	Leptosphaeria maculans	25.20	4.00e-06	47.00
IUUC-Laf-054538	Loxodonta africana	75.86	4.00e-155	540.00
IUUC-Mcc-055116	Macaca mulatta	96.08	1.00e-156	545.00
IUUC-Meu-056777	Macropus eugenii	71.51	1.00e-137	483.00
IUUC-Mpo-057376	Magnaporthe poae	23.70	5.00e-05	43.50
IUUC-Mtr-058142	Medicago truncatula	24.87	1.00e-07	52.00
IUUC-Mga-059716	Meleagris gallopavo	95.98	0.00e+00	651.00
IUUC-Mmr-060649	Microcebus murinus	98.39	0.00e+00	700.00
IUUC-Mdo-062535	Monodelphis domestica	96.78	0.00e+00	671.00
IUUC-Mmu-064036	Mus musculus	95.71	0.00e+00	681.00
IUUC-Mac-065338	Musa acuminata	24.02	7.00e-06	46.20
IUUC-Mpu-065719	Mustela putorius furo	76.85	9.00e-153	533.00
IUUC-Mlu-067219	Myotis lucifugus	76.11	2.00e-150	525.00
IUUC-Ncr-068691	Neurospora crassa	21.37	2.00e-04	40.80
IUUC-Nle-068983	Nomascus leucogenys	98.03	0.00e+00	654.00
IUUC-Opr-070467	Ochotona princeps	76.85	8.00e-153	533.00
IUUC-Ont-071566	Oreochromis niloticus	75.70	1.00e-159	555.00
IUUC-Oan-073368	Ornithorhynchus anatinus	77.74	3.00e-153	534.00
IUUC-Ocu-074854	Oryctolagus cuniculus	96.65	0.00e+00	656.00
IUUC-Ola-086364	Oryzias latipes	75.98	4.00e-159	553.00
IUUC-Oar-089547	Ovis aries	75.81	1.00e-148	519.00
IUUC-Ptr-091423	Pan troglodytes	97.86	0.00e+00	689.00
IUUC-Pan-092378	Papio anubis	77.15	3.00e-153	534.00
IUUC-Psi-093638	Pelodiscus sinensis	96.51	0.00e+00	658.00
IUUC-Pma-094384	Petromyzon marinus	62.92	3.00e-53	200.00
IUUC-Pno-095027	Phaeosphaeria nodorum	22.73	7.00e-07	49.30
IUUC-Pfo-096031	Poecilia formosa	75.14	1.00e-160	558.00
IUUC-Pab-097886	Pongo abelii	98.03	0.00e+00	654.00
IUUC-Pop-099430	Populus trichocarpa	25.47	2.00e-06	48.50
IUUC-Pca-101138	Procavia capensis	76.85	8.00e-153	533.00
IUUC-Ppe-101293	Prunus persica	23.42	6.00e-07	49.30
IUUC-Pva-103215	Pteropus vampyrus	97.86	0.00e+00	694.00
IUUC-Pte-104238	Pyrenophora teres	29.49	1.00e-05	44.70
IUUC-Rno-105968	Rattus norvegicus	95.98	0.00e+00	681.00
IUUC-Sha-107595	Sarcophilus harrisii	76.85	9.00e-151	526.00
IUUC-Sja-107950	Schizosaccharomyces japonicus	16.97	2.00e-05	43.10
IUUC-Ssl-108527	Sclerotinia sclerotiorum	24.68	3.00e-06	47.00
IUUC-Smo-109552	Selaginella moellendorffii	19.70	4.00e-06	47.00
IUUC-Sly-110873	Solanum lycopersicum	25.27	3.00e-07	50.80
IUUC-Stu-112586	Solanum tuberosum	20.96	2.00e-05	45.10
IUUC-Sar-113076	Sorex araneus	90.73	7.00e-135	473.00
IUUC-Sre-115143	Sporisorium reilianum	25.00	7.10e-02	32.70
IUUC-Ssc-115755	Sus scrofa	76.26	5.00e-150	523.00
IUUC-Tgu-117326	Taeniopygia guttata	96.25	0.00e+00	651.00
IUUC-Tru-117858	Takifugu rubripes	84.62	0.00e+00	648.00
IUUC-Tsy-119296	Tarsius syrichta	90.62	3.00e-179	620.00
IUUC-Tni-119822	Tetraodon nigroviridis	75.49	1.00e-157	548.00
IUUC-Tca-120935	Theobroma cacao	25.27	6.00e-08	53.10
IUUC-Tbe-127366	Tupaia belangeri	75.96	2.00e-147	514.00
IUUC-Ttr-128484	Tursiops truncatus	87.40	1.00e-172	598.00
IUUC-Vpa-130304	Vicugna pacos	97.98	6.00e-155	539.00
IUUC-Vvi-131560	Vitis vinifera	22.54	1.00e-05	45.40
IUUC-Xtr-132062	Xenopus tropicalis	77.45	2.00e-152	531.00
IUUC-Xma-134288	Xiphophorus maculatus	75.98	3.00e-160	558.00
IUUC-Yli-134374	Yarrowia lipolytica	20.47	2.00e-03	37.70
IUUC-Zma-135310	Zea mays	24.20	2.00e-03	38.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence