iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058025

Ensembl Protein ID

KEH24340

UniProt Accession

A0A072UEY4; A0A072UEY4_MEDTR

Genbank Protein ID

KEH24340.1

Protein Name

Rhomboid family protein

Genbank Nucleotide ID

CM001223

Gene Name

MTR_7g107390

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_7g107390	KEH24340	KEH24340
MTR_7g107390	KEH24341	KEH24341

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	7.00e-08	33.8	369	406

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           +e+ + +l++MGFdr ++  aL+aa+++l++Ave L++
   Q: 369  SEEEIKKLIAMGFDRTQVEVALAAADGDLNVAVEILMS 406
           578899******************************97 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MRRPRTMRPN IVTEAGLPTR VNQWWENIPF FTSAVVIVCG AIYFVCLLVG YDSFSEICFL 60
PSAVVSRFQV YRIYTAILFH GSLLHVLFNM MALVPLGSEL ERIMGSVRLL YVTILLATSN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCGGAACTC GAAAGAGTGA AAAAAAAGAG AAGTAGAAGA ACGTTCTATA CTTGTACGAT 60
TTTCGCGAGT CAAGTGTGTG TCACTTCAAC ATTTCCATTC CCAAAACTGA ATCAGAAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF01694--Rhomboid
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity

KEGG

mtr:MTR_7g107390

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003104	Amborella trichopoda	61.23	4.00e-136	478.00
IUUC-Aly-006262	Arabidopsis lyrata	70.12	2.00e-140	491.00
IUUC-Ath-006650	Arabidopsis thaliana	67.76	2.00e-137	481.00
IUUC-Afl-008583	Aspergillus flavus	22.87	1.00e-04	39.70
IUUC-Bgr-012264	Blumeria graminis	25.00	8.00e-09	53.50
IUUC-Bci-013845	Botrytis cinerea	23.38	1.00e-08	53.10
IUUC-Bdi-014166	Brachypodium distachyon	62.50	3.00e-136	477.00
IUUC-Bol-015488	Brassica oleracea	67.08	4.00e-144	504.00
IUUC-Bra-017302	Brassica rapa	68.63	2.00e-150	525.00
IUUC-Cre-022648	Chlamydomonas reinhardtii	38.20	3.00e-36	145.00
IUUC-Cin-025396	Ciona intestinalis	42.86	2.10e+00	25.00
IUUC-Cme-027293	Cyanidioschyzon merolae	31.34	1.00e-16	80.10
IUUC-Dse-031546	Dothistroma septosporum	25.89	8.00e-09	53.10
IUUC-Fox-037841	Fusarium oxysporum	28.05	1.00e-03	36.60
IUUC-Fso-038300	Fusarium solani	28.03	3.00e-09	54.30
IUUC-Gma-042948	Glycine max	83.17	0.00e+00	633.00
IUUC-Hvu-047778	Hordeum vulgare	62.07	5.00e-134	470.00
IUUC-Itr-048333	Ictidomys tridecemlineatus	25.85	1.00e-03	36.60
IUUC-Lch-049560	Latimeria chalumnae	27.88	2.00e-05	43.10
IUUC-Lpe-051525	Leersia perrieri	63.77	1.00e-144	505.00
IUUC-Mac-064802	Musa acuminata	63.33	3.00e-140	491.00
IUUC-Oba-075871	Oryza barthii	58.27	1.00e-118	419.00
IUUC-Obr-076568	Oryza brachyantha	63.28	2.00e-142	498.00
IUUC-Ogl-077534	Oryza glaberrima	60.99	7.00e-129	452.00
IUUC-Ogu-078204	Oryza glumaepatula	58.02	2.00e-118	418.00
IUUC-Oin-079209	Oryza indica	60.99	7.00e-129	452.00
IUUC-Olo-080827	Oryza longistaminata	46.70	5.00e-36	143.00
IUUC-Oni-082642	Oryza nivara	53.83	1.00e-104	372.00
IUUC-Opu-083685	Oryza punctata	54.46	3.00e-113	400.00
IUUC-Oru-085021	Oryza rufipogon	53.83	1.00e-104	372.00
IUUC-Osa-086297	Oryza sativa	60.99	7.00e-129	452.00
IUUC-Olu-087599	Ostreococcus lucimarinus	27.45	3.00e-24	105.00
IUUC-Pno-095121	Phaeosphaeria nodorum	28.57	4.00e-04	37.00
IUUC-Ppa-095438	Physcomitrella patens	47.10	5.00e-95	340.00
IUUC-Pop-099200	Populus trichocarpa	71.12	2.00e-159	554.00
IUUC-Ppe-101907	Prunus persica	69.53	2.00e-159	555.00
IUUC-Sja-107839	Schizosaccharomyces japonicus	28.57	9.00e-08	50.10
IUUC-Ssl-108652	Sclerotinia sclerotiorum	24.24	3.00e-09	55.10
IUUC-Smo-109633	Selaginella moellendorffii	47.98	2.00e-90	325.00
IUUC-Sit-110586	Setaria italica	63.93	4.00e-145	507.00
IUUC-Sly-111682	Solanum lycopersicum	67.72	4.00e-149	520.00
IUUC-Stu-112146	Solanum tuberosum	67.72	2.00e-148	518.00
IUUC-Sbi-114385	Sorghum bicolor	64.27	2.00e-145	507.00
IUUC-Ssc-115544	Sus scrofa	27.92	3.00e-06	45.10
IUUC-Tca-120985	Theobroma cacao	73.49	1.00e-173	601.00
IUUC-Tvi-122530	Trichoderma virens	26.77	6.00e-08	50.40
IUUC-Tae-125486	Triticum aestivum	63.05	1.00e-134	472.00
IUUC-Tur-126741	Triticum urartu	67.86	2.00e-76	278.00
IUUC-Vvi-131200	Vitis vinifera	71.05	2.00e-152	531.00
IUUC-Yli-134620	Yarrowia lipolytica	28.24	1.00e-10	59.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence