iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074263

Ensembl Protein ID

ENSOCUP00000007936.3

UniProt Accession

G1SWR1; G1SWR1_RABIT

Genbank Protein ID

ENSOCUP00000007936

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02044163

Gene Name

RRP9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000009193.3	ENSOCUT00000009194.3	ENSOCUP00000007936.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-29	101.3	352	386
UBD/Beta-Prp	7.00e-54	183.0	175	436

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgv 34
           gH++s+ c+++ ++ ++vsG+dDg++ +W l++ +
   Q: 352  GHQGSIDCIHLiNEEHMVSGADDGSVALWGLSKKR 386
           8*********9999***************987655 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkl...........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc 86
           h+  itc+ ++pd+s ++++ +d ti+ w+v+tg +             +  gh++ v ++ +s+dgk+l++g + ++i +w+ +++  
   Q: 175  HQLSITCLVITPDDSAIFSAAKDCTIIKWSVETGRKlhviprakkgaEGQPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCRH 263
           56689999999*************************899988888887888888888******************************** PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
           ++t++gh d v  l+f + ++ l s+shdr ++vw++ +++ +e tl gh+++v  +   + ++++ +G+ D+tvr+W+++ ++ l   
   Q: 264  LYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVE-TLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFY 351
           ******************99***********************9.***********************************999988755 PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght...........dnvksvrfspnderlvsgssDgsiriWdlr 252
            g h++s+ ++ +  + +++vsg++dg+v lw l++++ ++ +++              +v+sv+++ n++++++gs+   +r+W + 
   Q: 352  -G-HQGSIDCIHLINE-EHMVSGADDGSVALWGLSKKRPLVVQRDAHglrgepgleqpFWVSSVAALLNTDLIATGSHSSCVRLWQCG 436
           .6.*********8886.7*****************999988888866699******999**************************875 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MKAPGVAARP GLSCHVSSLA GAGTHTAGSM SATAASRKRG KSALGSGAGA GPGKRRRKAD 60
SAGDRGKSKG GGKMNEEISS DSESESLAPR RREEEEEEEE LEETAQEKKL RLAKLYLEQL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTACCCCAA ACAGGGAGGA GTCACGCTCC AGAACGCGGA ATCCCGCATC TCTGGCGCCC 60
CCAAGCGGTC AGAGGACGCA GAGACAGCGC TTCTGGTTCG ACCCCCTCTT GAGAAATCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0034511--F:U3 snoRNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	33.77	2.00e-55	209.00
IUUC-Aml-002072	Ailuropoda melanoleuca	92.78	0.00e+00	754.00
IUUC-Atr-002824	Amborella trichopoda	36.90	3.00e-69	256.00
IUUC-Apl-003264	Anas platyrhynchos	75.00	1.00e-166	578.00
IUUC-Aca-004898	Anolis carolinensis	71.70	0.00e+00	632.00
IUUC-Aly-005535	Arabidopsis lyrata	38.30	8.00e-66	244.00
IUUC-Ath-007119	Arabidopsis thaliana	36.63	3.00e-71	262.00
IUUC-Ago-007710	Ashbya gossypii	28.54	5.00e-56	212.00
IUUC-Acl-008345	Aspergillus clavatus	33.58	3.00e-56	212.00
IUUC-Afl-008718	Aspergillus flavus	31.87	2.00e-54	207.00
IUUC-Afu-008966	Aspergillus fumigatus	30.21	1.00e-53	204.00
IUUC-Ani-009214	Aspergillus nidulans	31.94	2.00e-57	216.00
IUUC-Ang-009774	Aspergillus niger	32.84	1.00e-57	217.00
IUUC-Aor-009956	Aspergillus oryzae	31.87	2.00e-54	207.00
IUUC-Ate-010449	Aspergillus terreus	30.34	2.00e-54	206.00
IUUC-Ame-011860	Astyanax mexicanus	70.74	8.00e-168	583.00
IUUC-Bgr-012213	Blumeria graminis	29.98	6.00e-62	231.00
IUUC-Bta-012698	Bos taurus	90.97	0.00e+00	736.00
IUUC-Bci-013973	Botrytis cinerea	28.30	3.00e-59	223.00
IUUC-Bdi-014790	Brachypodium distachyon	36.91	4.00e-62	232.00
IUUC-Bol-016068	Brassica oleracea	37.57	3.00e-65	242.00
IUUC-Bra-017410	Brassica rapa	38.89	5.00e-61	228.00
IUUC-Cel-018616	Caenorhabditis elegans	37.27	3.00e-73	269.00
IUUC-Cja-019532	Callithrix jacchus	91.18	0.00e+00	747.00
IUUC-Cfa-020961	Canis familiaris	88.27	0.00e+00	739.00
IUUC-Cpo-021527	Cavia porcellus	90.59	0.00e+00	762.00
IUUC-Csa-023106	Chlorocebus sabaeus	94.57	0.00e+00	763.00
IUUC-Cin-025670	Ciona intestinalis	51.92	7.00e-124	437.00
IUUC-Csv-026172	Ciona savignyi	51.66	3.00e-117	414.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	33.48	4.00e-63	235.00
IUUC-Cne-027070	Cryptococcus neoformans	29.70	1.00e-47	184.00
IUUC-Cme-027125	Cyanidioschyzon merolae	26.44	2.00e-34	140.00
IUUC-Dre-027919	Danio rerio	67.44	1.00e-158	552.00
IUUC-Dno-029684	Dasypus novemcinctus	93.54	4.00e-168	583.00
IUUC-Dor-030363	Dipodomys ordii	84.73	1.00e-103	370.00
IUUC-Dse-031503	Dothistroma septosporum	31.60	1.00e-59	224.00
IUUC-Dme-031979	Drosophila melanogaster	44.11	8.00e-99	353.00
IUUC-Eca-033735	Equus caballus	94.53	0.00e+00	724.00
IUUC-Fca-036193	Felis catus	93.78	0.00e+00	741.00
IUUC-Fal-037058	Ficedula albicollis	70.83	5.00e-171	593.00
IUUC-Fox-038036	Fusarium oxysporum	32.48	1.00e-64	240.00
IUUC-Fso-038298	Fusarium solani	32.60	3.00e-62	233.00
IUUC-Gmo-038796	Gadus morhua	64.99	5.00e-141	494.00
IUUC-Ggr-040074	Gaeumannomyces graminis	31.23	2.00e-54	207.00
IUUC-Gga-040743	Gallus gallus	76.33	1.00e-136	478.00
IUUC-Gac-042583	Gasterosteus aculeatus	57.75	4.00e-163	567.00
IUUC-Gma-042659	Glycine max	39.95	2.00e-80	293.00
IUUC-Ggo-045543	Gorilla gorilla	93.49	0.00e+00	766.00
IUUC-Hsa-047017	Homo sapiens	94.34	0.00e+00	761.00
IUUC-Hvu-047173	Hordeum vulgare	37.70	3.00e-68	252.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	86.97	0.00e+00	760.00
IUUC-Kpa-049262	Komagataella pastoris	32.03	9.00e-58	217.00
IUUC-Lch-050566	Latimeria chalumnae	72.31	8.00e-155	540.00
IUUC-Lpe-051651	Leersia perrieri	35.15	8.00e-66	244.00
IUUC-Loc-051997	Lepisosteus oculatus	68.85	9.00e-163	566.00
IUUC-Lma-053182	Leptosphaeria maculans	30.71	2.00e-59	223.00
IUUC-Laf-054105	Loxodonta africana	93.92	0.00e+00	723.00
IUUC-Mcc-055215	Macaca mulatta	94.57	0.00e+00	765.00
IUUC-Meu-055943	Macropus eugenii	81.34	0.00e+00	660.00
IUUC-Mor-057069	Magnaporthe oryzae	33.41	3.00e-64	239.00
IUUC-Mpo-057358	Magnaporthe poae	31.49	4.00e-52	199.00
IUUC-Mtr-058209	Medicago truncatula	38.73	3.00e-78	285.00
IUUC-Mla-059043	Melampsora laricipopulina	26.79	3.00e-48	186.00
IUUC-Mga-060024	Meleagris gallopavo	74.32	1.00e-154	538.00
IUUC-Mvi-060371	Microbotryum violaceum	31.56	3.00e-65	242.00
IUUC-Mmr-061403	Microcebus murinus	94.92	0.00e+00	748.00
IUUC-Mdo-063026	Monodelphis domestica	77.24	0.00e+00	677.00
IUUC-Mmu-063646	Mus musculus	93.05	0.00e+00	754.00
IUUC-Mac-064801	Musa acuminata	37.00	2.00e-74	273.00
IUUC-Mpu-065760	Mustela putorius furo	91.60	0.00e+00	766.00
IUUC-Mlu-067963	Myotis lucifugus	93.98	0.00e+00	746.00
IUUC-Nfi-068288	Neosartorya fischeri	32.45	1.00e-57	217.00
IUUC-Ncr-068679	Neurospora crassa	32.52	7.00e-57	214.00
IUUC-Nle-069766	Nomascus leucogenys	85.74	0.00e+00	685.00
IUUC-Opr-070906	Ochotona princeps	95.38	0.00e+00	783.00
IUUC-Ont-071661	Oreochromis niloticus	68.59	2.00e-164	571.00
IUUC-Oan-073465	Ornithorhynchus anatinus	66.18	1.00e-149	523.00
IUUC-Oba-075607	Oryza barthii	37.60	2.00e-61	229.00
IUUC-Ogl-077387	Oryza glaberrima	36.77	7.00e-65	241.00
IUUC-Ogu-078323	Oryza glumaepatula	37.33	4.00e-65	242.00
IUUC-Oin-079977	Oryza indica	31.53	2.00e-43	169.00
IUUC-Olo-080857	Oryza longistaminata	37.24	4.00e-65	241.00
IUUC-Ome-081568	Oryza meridionalis	37.24	2.00e-64	240.00
IUUC-Oni-082685	Oryza nivara	37.60	2.00e-68	253.00
IUUC-Opu-084049	Oryza punctata	37.60	6.00e-65	241.00
IUUC-Oru-084348	Oryza rufipogon	37.60	2.00e-68	253.00
IUUC-Osa-086076	Oryza sativa	37.60	2.00e-68	253.00
IUUC-Ola-086991	Oryzias latipes	68.34	1.00e-160	559.00
IUUC-Olu-087891	Ostreococcus lucimarinus	36.25	5.00e-65	241.00
IUUC-Oga-088991	Otolemur garnettii	94.84	0.00e+00	760.00
IUUC-Oar-090430	Ovis aries	91.79	0.00e+00	714.00
IUUC-Ptr-091359	Pan troglodytes	94.57	0.00e+00	763.00
IUUC-Pan-092499	Papio anubis	94.34	0.00e+00	762.00
IUUC-Pma-094447	Petromyzon marinus	60.63	1.00e-127	449.00
IUUC-Pno-095008	Phaeosphaeria nodorum	30.98	3.00e-63	236.00
IUUC-Ppa-095680	Physcomitrella patens	39.11	1.00e-76	280.00
IUUC-Pfo-096430	Poecilia formosa	68.33	7.00e-162	563.00
IUUC-Pab-097649	Pongo abelii	94.34	0.00e+00	759.00
IUUC-Pop-100055	Populus trichocarpa	40.00	2.00e-77	283.00
IUUC-Pca-100317	Procavia capensis	75.50	4.00e-133	468.00
IUUC-Ppe-101999	Prunus persica	37.47	3.00e-77	282.00
IUUC-Pva-103046	Pteropus vampyrus	92.79	0.00e+00	751.00
IUUC-Pgr-103655	Puccinia graminis	29.24	3.00e-53	203.00
IUUC-Ptt-103812	Puccinia triticina	31.46	2.00e-47	183.00
IUUC-Pte-104243	Pyrenophora teres	29.92	3.00e-56	213.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	30.10	1.00e-58	221.00
IUUC-Rno-104973	Rattus norvegicus	89.96	0.00e+00	740.00
IUUC-Sce-106329	Saccharomyces cerevisiae	25.65	3.00e-50	192.00
IUUC-Sha-106941	Sarcophilus harrisii	85.35	0.00e+00	675.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	32.81	3.00e-62	232.00
IUUC-Spo-108329	Schizosaccharomyces pombe	35.89	8.00e-72	264.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	28.91	2.00e-59	223.00
IUUC-Smo-109198	Selaginella moellendorffii	38.10	6.00e-63	234.00
IUUC-Sit-109694	Setaria italica	37.20	1.00e-72	267.00
IUUC-Sly-111294	Solanum lycopersicum	37.44	1.00e-77	283.00
IUUC-Stu-112747	Solanum tuberosum	37.69	2.00e-78	286.00
IUUC-Sar-113315	Sorex araneus	70.33	2.00e-73	270.00
IUUC-Sbi-114694	Sorghum bicolor	36.41	3.00e-71	262.00
IUUC-Sre-114937	Sporisorium reilianum	29.26	4.00e-65	242.00
IUUC-Ssc-116127	Sus scrofa	94.03	0.00e+00	734.00
IUUC-Tgu-117242	Taeniopygia guttata	69.05	1.00e-106	378.00
IUUC-Tru-118285	Takifugu rubripes	67.42	2.00e-167	582.00
IUUC-Tni-120368	Tetraodon nigroviridis	66.92	2.00e-160	558.00
IUUC-Tca-121724	Theobroma cacao	36.55	4.00e-71	262.00
IUUC-Tre-122106	Trichoderma reesei	33.05	7.00e-67	248.00
IUUC-Tvi-122526	Trichoderma virens	32.41	6.00e-66	244.00
IUUC-Tae-122939	Triticum aestivum	37.17	6.00e-67	248.00
IUUC-Tur-126548	Triticum urartu	37.17	1.00e-66	247.00
IUUC-Tme-126985	Tuber melanosporum	33.76	4.00e-63	235.00
IUUC-Tbe-127923	Tupaia belangeri	96.23	0.00e+00	748.00
IUUC-Ttr-129308	Tursiops truncatus	87.84	0.00e+00	668.00
IUUC-Uma-129472	Ustilago maydis	30.41	3.00e-59	223.00
IUUC-Vda-129910	Verticillium dahliae	31.25	4.00e-62	232.00
IUUC-Vvi-131683	Vitis vinifera	38.76	2.00e-83	303.00
IUUC-Xtr-132118	Xenopus tropicalis	67.51	5.00e-157	547.00
IUUC-Xma-133804	Xiphophorus maculatus	67.83	2.00e-160	558.00
IUUC-Yli-134639	Yarrowia lipolytica	32.78	2.00e-61	229.00
IUUC-Zma-135884	Zea mays	36.82	5.00e-72	265.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence