iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111133

Ensembl Protein ID

Solyc07g006360.1.1

UniProt Accession

K4CBA7; K4CBA7_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g006360.1	Solyc07g006360.1.1	Solyc07g006360.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.30e-06	27.4	117	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d ++ lp C H+fh +C+  w         + +CPlCr
   Q: 117  CAVCLCEFesDDKLRWLPkCSHAFHMECIDTW------LLSHSTCPLCR 159
           ********9966699999**************......89999*****8 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MNQQLSLLQP PPPPFSTHDS SGGGIFNLNN KVSPSILLVI IILAIIFFIS GLLHLAVRCL 60
LRPSNRDPDD LDNVTALQGQ LQQLFNLHDA GVDQSFIDTL PVFNYKSIIG VKDPFDCAVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATCAGC AATTATCCCT TCTTCAACCA CCTCCACCCC CATTTTCTAC TCATGATTCT 60
AGTGGTGGTG GTATTTTCAA TTTGAATAAC AAGGTTAGTC CAAGTATACT TCTAGTAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sly:101260833

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002500	Amborella trichopoda	45.42	3.00e-82	298.00
IUUC-Aly-006179	Arabidopsis lyrata	48.21	7.00e-79	286.00
IUUC-Ath-006858	Arabidopsis thaliana	47.32	1.00e-76	279.00
IUUC-Ago-007872	Ashbya gossypii	34.88	6.00e-12	62.80
IUUC-Bdi-014934	Brachypodium distachyon	67.28	3.00e-45	175.00
IUUC-Bol-015406	Brassica oleracea	47.74	2.00e-76	278.00
IUUC-Bra-016948	Brassica rapa	47.96	4.00e-77	281.00
IUUC-Dme-032187	Drosophila melanogaster	38.14	3.00e-15	77.00
IUUC-Gma-043592	Glycine max	51.68	1.00e-98	352.00
IUUC-Hvu-047745	Hordeum vulgare	36.19	4.00e-51	194.00
IUUC-Kpa-049389	Komagataella pastoris	32.37	2.00e-10	58.90
IUUC-Lpe-051680	Leersia perrieri	42.36	5.00e-60	224.00
IUUC-Mtr-058782	Medicago truncatula	54.26	1.00e-99	355.00
IUUC-Mac-064639	Musa acuminata	46.00	1.00e-84	305.00
IUUC-Oba-075403	Oryza barthii	40.72	1.00e-65	243.00
IUUC-Obr-076503	Oryza brachyantha	47.13	4.00e-58	218.00
IUUC-Ogl-077574	Oryza glaberrima	40.94	3.00e-65	241.00
IUUC-Ogu-077986	Oryza glumaepatula	40.72	3.00e-65	241.00
IUUC-Oin-079091	Oryza indica	41.28	4.00e-66	244.00
IUUC-Olo-080854	Oryza longistaminata	68.00	2.00e-46	179.00
IUUC-Ome-081627	Oryza meridionalis	41.70	1.00e-64	239.00
IUUC-Oni-082260	Oryza nivara	41.49	3.00e-65	241.00
IUUC-Opu-083578	Oryza punctata	41.31	4.00e-62	231.00
IUUC-Oru-084794	Oryza rufipogon	40.94	3.00e-65	241.00
IUUC-Osa-085348	Oryza sativa	40.94	3.00e-65	241.00
IUUC-Ppa-095806	Physcomitrella patens	37.38	7.00e-40	157.00
IUUC-Pop-099449	Populus trichocarpa	54.77	3.00e-109	387.00
IUUC-Ppe-101557	Prunus persica	56.46	5.00e-107	380.00
IUUC-Sce-106223	Saccharomyces cerevisiae	32.94	2.00e-09	54.30
IUUC-Sit-109852	Setaria italica	42.40	5.00e-62	231.00
IUUC-Stu-112868	Solanum tuberosum	91.74	0.00e+00	734.00
IUUC-Sbi-114435	Sorghum bicolor	45.51	5.00e-66	244.00
IUUC-Tca-121042	Theobroma cacao	57.20	7.00e-105	373.00
IUUC-Tae-123826	Triticum aestivum	38.10	6.00e-51	194.00
IUUC-Tur-126047	Triticum urartu	44.60	1.00e-49	189.00
IUUC-Vvi-130906	Vitis vinifera	55.71	5.00e-109	387.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence