iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006665

UUCD1 version

UUC-ArT-00103

Ensembl Protein ID

AT3G23280.1

UniProt Accession

Q4FE47; Q8L9Z0; Q94AX6; Q9LTC1; XB35_ARATH

Genbank Protein ID

AAZ14068.1; BAA95741.1; AEE76746.1; AEE76747.1; AAK73995.1; AAL31143.1; AAM65682.1

Protein Name

Putative E3 ubiquitin-protein ligase XBAT35; Ankyrin repeat domain and RING finger-containing protein XBAT35; Protein XB3 homolog 5; RING-type E3 ubiquitin transferase XBAT35

Genbank Nucleotide ID

DQ086844; AB025608; CP002686; CP002686; AY045637; AY059650; AY088137

Gene Name

XBAT35; At3g23280; K14B15.19

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G23280	AT3G23280.1	AT3G23280.1
AT3G23280	AT3G23280.2	AT3G23280.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	15644464; 20511490

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	3.00e-07	31.8	411	450

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvf.hadClqkwpglknssskefrCPlCr 46
           CaiCl+ +++ ++ +pCgHv  + +Cl+ +      +sk++ CP+Cr
   Q: 411  CAICLDAPSEAVC-VPCGHVAgCMSCLKEI------KSKNWGCPVCR 450
           ******9999566.*****888********......**********8 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

No E3 ubiquitin-protein ligase activity observed when associated with the E2 enzyme UBC8 in vitro.

Protein Sequence
(Fasta)

MGQQQSKGEL LYQQVSYGNS EGIRALHRDG GDLEWMDREG KTPLILACMN SELFDVAKTL 60
IELGSNVNAY RPGRHAGTPL HHAAKRGLEN TVKLLLSHGA NPLVLNDDCQ TPLEVARVKG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAAACGTCAA ACGTGAATTA CAAAGTTGTT GTTTCCTCTG AATTTCTCAG AACTCTTCTT 60
TGCTAAGGAA AAATTAAATA TCCATCCAAC TGTGTGAATT AGATATTTTC TCTTATCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0025--Alternative splicing
KW-0040--ANK repeat
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR001370--BIR_rpt
IPR001841--Znf_RING

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS50089--ZF_RING_2

Pfam

PF00023--Ank

SMART

SM00248--ANK
SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0000151--C:ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

ath:AT3G23280

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003019	Amborella trichopoda	45.56	8.00e-118	416.00
IUUC-Aly-006120	Arabidopsis lyrata	95.24	0.00e+00	862.00
IUUC-Bol-016420	Brassica oleracea	81.82	0.00e+00	705.00
IUUC-Bra-017117	Brassica rapa	82.25	0.00e+00	693.00
IUUC-Gma-043755	Glycine max	53.89	2.00e-136	478.00
IUUC-Mtr-058502	Medicago truncatula	50.38	8.00e-90	323.00
IUUC-Opr-070484	Ochotona princeps	37.74	3.00e-10	58.50
IUUC-Ont-072370	Oreochromis niloticus	40.40	5.00e-12	65.10
IUUC-Pop-099929	Populus trichocarpa	58.40	6.00e-147	513.00
IUUC-Ppe-101537	Prunus persica	56.16	4.00e-150	523.00
IUUC-Smo-109365	Selaginella moellendorffii	38.63	4.00e-75	274.00
IUUC-Sly-111568	Solanum lycopersicum	55.56	2.00e-147	515.00
IUUC-Stu-112345	Solanum tuberosum	54.96	8.00e-147	513.00
IUUC-Tca-121150	Theobroma cacao	70.49	8.00e-121	426.00
IUUC-Vvi-131640	Vitis vinifera	57.46	2.00e-155	541.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence