iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117000

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01012969

Gene Name

LONRF2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000010057.1	ENSTGUT00000010493.1	ENSTGUP00000010383.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-06	27.4	293	331
E3 activity/RING/U-box	4.40e-08	32.9	289	336

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+  f + p+++pCgH+f+++Cl++          + +CPlC+
   Q: 293  CSLCMRLFYE-PVTTPCGHTFCLKCLERC------LDHNPLCPLCK 331
           ****999977.***************999......9*********7 PP

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplte 52
           ++f C++ + l+ +Pv++p+G+t+  +++e++l+++   cP+++++l+e
   Q: 289  SDFECSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPL-CPLCKEKLSE 336
           58*********************************999.********76 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

PAAAQSRVIV VQGILLHKWF CAENRARRLR AEGDVLRERQ ELPAALEKYN QALEMAPCKC 60
SLIAQRAELC TLMKNYQQAL HDADILCRNK PHWPAGHYVK AKALSGLERT EEALKEFLYC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGGCTGCCG CCCAATCGCG TGTCATCGTG GTTCAGGGCA TTCTGTTGCA CAAGTGGTTC 60
TGTGCCGAGA ACCGGGCGCG GCGGCTCCGC GCCGAGGGCG ACGTGCTGCG GGAGCGCCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0802--TPR repeat

Interpro

IPR023114--Elongated_TPR_rpt_dom
IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR003613--Ubox_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg

SMART

SM00464--LON
SM00184--RING
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001867	Ailuropoda melanoleuca	61.93	0.00e+00	712.00
IUUC-Atr-002972	Amborella trichopoda	43.50	5.00e-47	181.00
IUUC-Apl-003355	Anas platyrhynchos	94.54	0.00e+00	1052.00
IUUC-Aca-004822	Anolis carolinensis	82.62	0.00e+00	998.00
IUUC-Aly-005476	Arabidopsis lyrata	35.94	1.00e-38	154.00
IUUC-Ame-010750	Astyanax mexicanus	63.37	0.00e+00	701.00
IUUC-Cja-019041	Callithrix jacchus	60.14	0.00e+00	686.00
IUUC-Cfa-020025	Canis familiaris	62.34	0.00e+00	710.00
IUUC-Csa-023324	Chlorocebus sabaeus	63.38	0.00e+00	655.00
IUUC-Csv-026364	Ciona savignyi	45.18	5.00e-80	290.00
IUUC-Dre-028400	Danio rerio	61.17	0.00e+00	631.00
IUUC-Eeu-034779	Erinaceus europaeus	49.09	9.00e-137	479.00
IUUC-Fca-036276	Felis catus	62.34	0.00e+00	715.00
IUUC-Fal-036669	Ficedula albicollis	98.38	0.00e+00	1143.00
IUUC-Fso-038334	Fusarium solani	41.67	7.00e-42	164.00
IUUC-Gmo-039511	Gadus morhua	78.57	3.00e-136	478.00
IUUC-Gga-041253	Gallus gallus	93.44	0.00e+00	1119.00
IUUC-Gma-042919	Glycine max	35.22	5.00e-40	158.00
IUUC-Ggo-045501	Gorilla gorilla	60.88	0.00e+00	692.00
IUUC-Hsa-046630	Homo sapiens	60.98	0.00e+00	691.00
IUUC-Itr-048224	Ictidomys tridecemlineatus	60.88	0.00e+00	631.00
IUUC-Lch-049788	Latimeria chalumnae	65.59	0.00e+00	762.00
IUUC-Loc-051922	Lepisosteus oculatus	65.75	0.00e+00	754.00
IUUC-Mcc-054828	Macaca mulatta	63.38	0.00e+00	654.00
IUUC-Meu-055901	Macropus eugenii	59.72	0.00e+00	678.00
IUUC-Mor-056963	Magnaporthe oryzae	43.88	4.00e-43	168.00
IUUC-Mga-059760	Meleagris gallopavo	94.44	0.00e+00	1036.00
IUUC-Mmr-061350	Microcebus murinus	61.00	0.00e+00	639.00
IUUC-Mdo-062203	Monodelphis domestica	76.12	0.00e+00	920.00
IUUC-Mmu-064118	Mus musculus	60.00	1.00e-176	612.00
IUUC-Mac-065566	Musa acuminata	37.93	9.00e-44	171.00
IUUC-Mpu-065764	Mustela putorius furo	61.63	0.00e+00	717.00
IUUC-Nle-069616	Nomascus leucogenys	61.05	0.00e+00	696.00
IUUC-Ont-072142	Oreochromis niloticus	59.73	0.00e+00	672.00
IUUC-Ome-081927	Oryza meridionalis	26.15	1.00e-10	60.10
IUUC-Ola-086534	Oryzias latipes	54.67	3.00e-172	598.00
IUUC-Oga-088972	Otolemur garnettii	60.64	0.00e+00	696.00
IUUC-Ptr-090992	Pan troglodytes	61.28	0.00e+00	696.00
IUUC-Pan-092180	Papio anubis	59.65	0.00e+00	679.00
IUUC-Psi-093423	Pelodiscus sinensis	87.18	0.00e+00	930.00
IUUC-Pma-094231	Petromyzon marinus	66.42	2.00e-117	414.00
IUUC-Pfo-096363	Poecilia formosa	60.67	0.00e+00	676.00
IUUC-Pab-097974	Pongo abelii	60.88	0.00e+00	691.00
IUUC-Pop-100044	Populus trichocarpa	40.17	9.00e-45	174.00
IUUC-Ppe-101621	Prunus persica	42.64	5.00e-38	151.00
IUUC-Pva-102269	Pteropus vampyrus	57.62	0.00e+00	628.00
IUUC-Rno-105905	Rattus norvegicus	60.66	0.00e+00	628.00
IUUC-Sly-111396	Solanum lycopersicum	34.87	2.00e-42	166.00
IUUC-Sre-114977	Sporisorium reilianum	33.33	1.00e-34	141.00
IUUC-Tru-118016	Takifugu rubripes	59.34	0.00e+00	657.00
IUUC-Tni-119913	Tetraodon nigroviridis	56.70	0.00e+00	626.00
IUUC-Tca-121632	Theobroma cacao	33.15	2.00e-46	179.00
IUUC-Tre-121992	Trichoderma reesei	25.96	1.00e-08	53.90
IUUC-Tvi-122557	Trichoderma virens	26.83	9.00e-05	41.20
IUUC-Ttr-128666	Tursiops truncatus	56.92	1.00e-178	619.00
IUUC-Vvi-130910	Vitis vinifera	34.11	2.00e-40	159.00
IUUC-Xtr-132065	Xenopus tropicalis	67.64	0.00e+00	798.00
IUUC-Xma-134324	Xiphophorus maculatus	61.34	0.00e+00	676.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence