iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014069

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100841754; BRADI_3g43540

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G43540	BRADI3G43540.1	BRADI3G43540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.30e-32	109.8	77	150

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +vpe+flCpIs e+MrdPvvl+sG+tydr+ I++wl+ g++tcP t+q l+++ l+ n+ +r++i++wc en++
   Q: 77   SVPEQFLCPISSEIMRDPVVLASGQTYDRRFIQEWLSAGNRTCPQTQQVLSNTILIANHLVRSMISQWCTENGI 150
           59*********************************************************************986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAKPTPVATA EEAAALRRRL RRLVAAVTTG GADGDAFDEA ASALAALRAA ELGRRKDGGG 60
RGGAAGAGGK RTATQASVPE QFLCPISSEI MRDPVVLASG QTYDRRFIQE WLSAGNRTCP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTCTCTTT CTTTCTCCCT TTCCCCCCTA GCTTCCTTCC CCGAGGGGAC TGCCACGTCC 60
ATGCCAGCCG GAGCCCATCG CGAGGCCGAC CGACACCGCC ACCGAGAGAA CGGACGGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100841754

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006420	Arabidopsis lyrata	51.41	1.00e-112	399.00
IUUC-Ath-007457	Arabidopsis thaliana	51.16	1.00e-113	402.00
IUUC-Bol-015764	Brassica oleracea	51.15	2.00e-109	388.00
IUUC-Bra-017759	Brassica rapa	51.40	6.00e-110	390.00
IUUC-Gma-043611	Glycine max	52.94	4.00e-111	394.00
IUUC-Lpe-050825	Leersia perrieri	84.58	0.00e+00	655.00
IUUC-Mtr-057877	Medicago truncatula	48.84	1.00e-106	379.00
IUUC-Mac-065616	Musa acuminata	67.70	6.00e-146	509.00
IUUC-Oba-075311	Oryza barthii	86.33	0.00e+00	637.00
IUUC-Obr-076232	Oryza brachyantha	84.72	0.00e+00	633.00
IUUC-Ogl-077647	Oryza glaberrima	86.60	0.00e+00	664.00
IUUC-Ogu-078448	Oryza glumaepatula	86.86	0.00e+00	667.00
IUUC-Oin-079693	Oryza indica	86.60	0.00e+00	638.00
IUUC-Olo-080462	Oryza longistaminata	86.79	0.00e+00	664.00
IUUC-Ome-081796	Oryza meridionalis	86.75	0.00e+00	658.00
IUUC-Oni-082158	Oryza nivara	86.86	0.00e+00	667.00
IUUC-Opu-084131	Oryza punctata	87.05	0.00e+00	666.00
IUUC-Oru-084335	Oryza rufipogon	86.86	0.00e+00	667.00
IUUC-Osa-085556	Oryza sativa	86.86	0.00e+00	665.00
IUUC-Pop-099087	Populus trichocarpa	54.69	3.00e-114	404.00
IUUC-Ppe-101662	Prunus persica	55.30	1.00e-121	429.00
IUUC-Sit-110812	Setaria italica	83.90	0.00e+00	638.00
IUUC-Sly-110911	Solanum lycopersicum	51.44	4.00e-117	414.00
IUUC-Stu-112732	Solanum tuberosum	51.96	5.00e-118	417.00
IUUC-Sbi-114814	Sorghum bicolor	84.36	0.00e+00	653.00
IUUC-Tca-121080	Theobroma cacao	53.23	8.00e-122	429.00
IUUC-Vvi-131590	Vitis vinifera	55.84	1.00e-126	445.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence