iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-063043

Ensembl Protein ID

ENSMODP00000007837.2

UniProt Accession

F7B4G6; F7B4G6_MONDO

Protein Name

Uncharacterized protein

Gene Name

TDRD3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000006316.3	ENSMODT00000007994.3	ENSMODP00000007837.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.80e-08	34.4	195	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           de +l  ++eMGF++e+ +qaL +++nnleaA++ Ll+
   Q: 195  DEKALKHITEMGFSKEASRQALMDNGNNLEAALNVLLN 232
           78999*******************************97 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MLRLQMTDGH ISCTAVEFNY MSKISLNTPP GTKVKLSGII DIKNGFLLLN DTNTVVLGGE 60
VEHLIEKWEL QRSLSKHNRS NIGTEGGPPP FVPFGQKCVS HIQVDSRELD RRKTLQVTAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCGGGGCT GAAGGAGCTG TCCCCTACGA GGCTCCACGT CGGTCCCGAA AAAACCCGGC 60
AGTAGATTTT CAGCGGGAGG ACCGGACTTG GAGTCCAAGA GTCCATGGAA TCTGCATTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013894--RMI1_N
IPR002999--Tudor
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50304--TUDOR
PS50030--UBA

Pfam

PF08585--RMI1_N
PF00567--TUDOR
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0035145--C:exon-exon junction complex
GO:0003682--F:chromatin binding
GO:0003723--F:RNA binding
GO:0003713--F:transcription coactivator activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000323	Aegilops tauschii	33.68	1.00e-11	63.90
IUUC-Aml-001751	Ailuropoda melanoleuca	70.10	0.00e+00	746.00
IUUC-Atr-002788	Amborella trichopoda	33.68	1.00e-11	64.30
IUUC-Apl-004055	Anas platyrhynchos	63.99	0.00e+00	677.00
IUUC-Aca-004367	Anolis carolinensis	76.56	8.00e-177	613.00
IUUC-Aly-006072	Arabidopsis lyrata	34.31	2.00e-13	70.10
IUUC-Ath-007491	Arabidopsis thaliana	33.33	5.00e-13	68.90
IUUC-Ame-011439	Astyanax mexicanus	64.55	7.00e-73	268.00
IUUC-Bta-012894	Bos taurus	68.96	0.00e+00	764.00
IUUC-Bdi-014462	Brachypodium distachyon	31.45	9.00e-13	68.20
IUUC-Bol-015343	Brassica oleracea	37.11	3.00e-13	69.30
IUUC-Bra-016787	Brassica rapa	33.33	2.00e-13	70.10
IUUC-Cel-018154	Caenorhabditis elegans	36.36	1.00e-16	81.30
IUUC-Cja-019364	Callithrix jacchus	69.59	0.00e+00	755.00
IUUC-Cfa-021166	Canis familiaris	69.34	0.00e+00	718.00
IUUC-Cpo-021678	Cavia porcellus	63.09	0.00e+00	669.00
IUUC-Csa-023299	Chlorocebus sabaeus	69.59	0.00e+00	795.00
IUUC-Cho-024694	Choloepus hoffmanni	90.59	3.00e-132	465.00
IUUC-Cin-025191	Ciona intestinalis	39.01	6.00e-23	100.00
IUUC-Csv-026348	Ciona savignyi	48.72	2.00e-06	43.90
IUUC-Dre-028715	Danio rerio	43.06	2.00e-102	366.00
IUUC-Dno-030091	Dasypus novemcinctus	69.27	0.00e+00	782.00
IUUC-Dor-030807	Dipodomys ordii	60.32	2.00e-174	605.00
IUUC-Dme-031770	Drosophila melanogaster	30.58	2.00e-20	94.40
IUUC-Ete-032507	Echinops telfairi	58.33	2.00e-129	456.00
IUUC-Eca-033406	Equus caballus	69.20	0.00e+00	724.00
IUUC-Eeu-034600	Erinaceus europaeus	62.11	1.00e-173	603.00
IUUC-Fca-035916	Felis catus	70.00	0.00e+00	749.00
IUUC-Fal-036658	Ficedula albicollis	63.61	0.00e+00	649.00
IUUC-Gmo-038974	Gadus morhua	59.03	7.00e-67	248.00
IUUC-Gga-040195	Gallus gallus	64.15	0.00e+00	721.00
IUUC-Gac-042537	Gasterosteus aculeatus	54.96	2.00e-89	323.00
IUUC-Gma-044234	Glycine max	41.24	3.00e-16	79.70
IUUC-Ggo-044715	Gorilla gorilla	68.88	0.00e+00	793.00
IUUC-Hsa-045814	Homo sapiens	69.92	0.00e+00	800.00
IUUC-Hvu-047365	Hordeum vulgare	35.42	8.00e-12	65.10
IUUC-Itr-047866	Ictidomys tridecemlineatus	68.71	0.00e+00	764.00
IUUC-Lch-050393	Latimeria chalumnae	64.27	5.00e-136	478.00
IUUC-Lpe-050691	Leersia perrieri	34.38	4.00e-13	69.30
IUUC-Loc-052859	Lepisosteus oculatus	58.80	2.00e-103	369.00
IUUC-Laf-053953	Loxodonta africana	62.87	6.00e-139	487.00
IUUC-Mcc-055846	Macaca mulatta	69.27	0.00e+00	790.00
IUUC-Meu-056790	Macropus eugenii	64.29	0.00e+00	680.00
IUUC-Mtr-058749	Medicago truncatula	39.56	4.00e-14	72.40
IUUC-Mla-058959	Melampsora laricipopulina	38.46	2.00e-06	46.60
IUUC-Mga-059656	Meleagris gallopavo	64.31	0.00e+00	666.00
IUUC-Mmr-061089	Microcebus murinus	70.24	0.00e+00	761.00
IUUC-Mmu-063654	Mus musculus	65.47	0.00e+00	676.00
IUUC-Mac-064947	Musa acuminata	39.80	7.00e-10	58.50
IUUC-Mpu-066115	Mustela putorius furo	70.41	0.00e+00	725.00
IUUC-Mlu-066974	Myotis lucifugus	70.00	0.00e+00	795.00
IUUC-Nle-069184	Nomascus leucogenys	69.11	0.00e+00	789.00
IUUC-Opr-070770	Ochotona princeps	60.16	0.00e+00	658.00
IUUC-Ont-072040	Oreochromis niloticus	51.44	3.00e-97	349.00
IUUC-Oan-073448	Ornithorhynchus anatinus	84.42	5.00e-75	273.00
IUUC-Ocu-074405	Oryctolagus cuniculus	68.78	0.00e+00	737.00
IUUC-Oba-075977	Oryza barthii	36.46	1.00e-07	51.20
IUUC-Obr-076298	Oryza brachyantha	35.42	5.00e-13	68.90
IUUC-Ogl-077706	Oryza glaberrima	36.46	1.00e-07	51.20
IUUC-Ogu-078381	Oryza glumaepatula	36.46	3.00e-08	52.80
IUUC-Oin-080150	Oryza indica	36.46	9.00e-08	51.20
IUUC-Ome-081153	Oryza meridionalis	35.42	3.00e-07	49.70
IUUC-Oni-083115	Oryza nivara	36.46	1.00e-07	50.80
IUUC-Opu-083860	Oryza punctata	35.42	5.00e-12	65.90
IUUC-Oru-084859	Oryza rufipogon	36.46	1.00e-07	51.20
IUUC-Osa-085567	Oryza sativa	36.46	3.00e-06	46.20
IUUC-Ola-087049	Oryzias latipes	53.78	5.00e-93	335.00
IUUC-Oga-088455	Otolemur garnettii	69.68	0.00e+00	774.00
IUUC-Oar-090096	Ovis aries	68.80	0.00e+00	764.00
IUUC-Ptr-090974	Pan troglodytes	69.43	0.00e+00	809.00
IUUC-Pan-092657	Papio anubis	69.43	0.00e+00	793.00
IUUC-Psi-093113	Pelodiscus sinensis	66.83	0.00e+00	751.00
IUUC-Ppa-095466	Physcomitrella patens	40.22	3.00e-15	76.30
IUUC-Pfo-096631	Poecilia formosa	49.77	7.00e-93	335.00
IUUC-Pab-098070	Pongo abelii	69.76	0.00e+00	796.00
IUUC-Pop-099235	Populus trichocarpa	35.42	5.00e-13	68.90
IUUC-Pca-101032	Procavia capensis	63.58	0.00e+00	708.00
IUUC-Ppe-101793	Prunus persica	38.54	4.00e-15	75.90
IUUC-Pva-102290	Pteropus vampyrus	68.00	0.00e+00	755.00
IUUC-Rno-105080	Rattus norvegicus	63.87	6.00e-180	624.00
IUUC-Sha-107598	Sarcophilus harrisii	74.11	0.00e+00	809.00
IUUC-Sit-110735	Setaria italica	37.50	2.00e-13	70.10
IUUC-Sly-111126	Solanum lycopersicum	38.71	2.00e-13	70.10
IUUC-Stu-112780	Solanum tuberosum	39.58	1.00e-15	77.40
IUUC-Sar-113418	Sorex araneus	68.72	0.00e+00	734.00
IUUC-Sbi-113925	Sorghum bicolor	36.46	8.00e-13	68.20
IUUC-Ssc-115712	Sus scrofa	69.64	0.00e+00	758.00
IUUC-Tgu-117148	Taeniopygia guttata	63.45	0.00e+00	682.00
IUUC-Tru-117831	Takifugu rubripes	57.06	5.00e-91	328.00
IUUC-Tsy-118917	Tarsius syrichta	67.97	0.00e+00	712.00
IUUC-Tni-120783	Tetraodon nigroviridis	55.93	2.00e-90	326.00
IUUC-Tca-121430	Theobroma cacao	43.75	4.00e-06	45.80
IUUC-Tae-123752	Triticum aestivum	33.68	1.00e-11	63.90
IUUC-Tur-126238	Triticum urartu	34.38	3.00e-11	62.80
IUUC-Ttr-128615	Tursiops truncatus	63.23	0.00e+00	671.00
IUUC-Vpa-130531	Vicugna pacos	70.24	0.00e+00	778.00
IUUC-Vvi-131607	Vitis vinifera	41.76	9.00e-13	67.80
IUUC-Xtr-132787	Xenopus tropicalis	64.63	7.00e-167	580.00
IUUC-Xma-133815	Xiphophorus maculatus	52.54	1.00e-91	331.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence