iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sar-113010

Ensembl Protein ID

ENSSARP00000011679.1

UniProt Accession

B3RF51; B3RF51_SORAR

Genbank Protein ID

ACE77677.1

Protein Name

RNA binding motif protein 12, isoform 1 (Predicted)

Genbank Nucleotide ID

DP000783

Gene Name

CPNE3; RBM12

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSARG00000012917.1	ENSSART00000012929.1	ENSSARP00000011679.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	34.68	2.00e-23	102.00	IUUC-Ots-000026
E3 activity/RING/RING	32.11	1.00e-22	98.20	IUUC-Ots-000013

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorex araneus

Protein Sequence
(Fasta)

MAAQCVTKVE LNISCDNLLD KDVGSKSDPL CVLFLNTSGQ QWYEVERTER IKNCLNPKFS 60
KTFIIDYYFE VVQKLKFGIY DIDNKTIDLS DDDFLGECEC TLGQIVSSKK LTRPLVLKNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGCCC AGTGTGTGAC GAAGGTGGAG CTGAATATCT CCTGTGACAA TCTTTTGGAT 60
AAAGATGTAG GATCCAAGTC GGACCCTTTA TGTGTGTTGT TTTTGAACAC CAGCGGTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR000008--C2_dom
IPR010734--Copine
IPR012677--Nucleotide-bd_a/b_plait
IPR034591--RBM12_RRM1
IPR034594--RBM12_RRM2
IPR000504--RRM_dom
IPR002035--VWF_A

PROSITE

PS50004--C2
PS50102--RRM

Pfam

PF00168--C2
PF07002--Copine
PF00076--RRM_1

SMART

SM00239--C2
SM00360--RRM
SM00327--VWA

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001090	Aegilops tauschii	34.96	6.00e-23	100.00
IUUC-Aml-002030	Ailuropoda melanoleuca	62.62	0.00e+00	669.00
IUUC-Atr-003148	Amborella trichopoda	33.33	1.00e-18	86.70
IUUC-Apl-003690	Anas platyrhynchos	65.99	0.00e+00	663.00
IUUC-Aca-005177	Anolis carolinensis	67.48	0.00e+00	732.00
IUUC-Aly-005819	Arabidopsis lyrata	34.15	2.00e-24	106.00
IUUC-Ath-007080	Arabidopsis thaliana	34.96	2.00e-24	106.00
IUUC-Ang-009660	Aspergillus niger	28.57	4.30e+00	26.20
IUUC-Ame-011404	Astyanax mexicanus	45.39	3.00e-101	361.00
IUUC-Bta-012757	Bos taurus	49.81	8.00e-139	486.00
IUUC-Bdi-014521	Brachypodium distachyon	34.96	3.00e-23	102.00
IUUC-Bol-016568	Brassica oleracea	35.77	1.00e-25	110.00
IUUC-Bra-017730	Brassica rapa	35.77	9.00e-26	110.00
IUUC-Cel-018357	Caenorhabditis elegans	30.67	3.00e-19	93.60
IUUC-Cja-019806	Callithrix jacchus	62.55	0.00e+00	682.00
IUUC-Cfa-020719	Canis familiaris	62.62	0.00e+00	671.00
IUUC-Cpo-022547	Cavia porcellus	62.97	0.00e+00	676.00
IUUC-Cre-022882	Chlamydomonas reinhardtii	31.44	2.00e-17	82.40
IUUC-Csa-023455	Chlorocebus sabaeus	62.87	0.00e+00	677.00
IUUC-Cho-024698	Choloepus hoffmanni	74.77	0.00e+00	785.00
IUUC-Cin-025331	Ciona intestinalis	28.06	3.00e-15	74.70
IUUC-Csv-026082	Ciona savignyi	29.34	5.00e-17	80.90
IUUC-Dre-027464	Danio rerio	48.60	1.00e-137	482.00
IUUC-Dno-029223	Dasypus novemcinctus	59.72	2.00e-168	584.00
IUUC-Dor-030419	Dipodomys ordii	47.68	1.00e-99	356.00
IUUC-Ete-032325	Echinops telfairi	54.82	5.00e-67	248.00
IUUC-Eca-034145	Equus caballus	50.00	2.00e-139	488.00
IUUC-Eeu-034962	Erinaceus europaeus	89.66	0.00e+00	920.00
IUUC-Fca-035987	Felis catus	63.39	0.00e+00	676.00
IUUC-Fal-036712	Ficedula albicollis	64.22	0.00e+00	702.00
IUUC-Gmo-038771	Gadus morhua	56.43	1.00e-82	299.00
IUUC-Gga-040253	Gallus gallus	66.17	0.00e+00	709.00
IUUC-Gac-042313	Gasterosteus aculeatus	50.00	2.00e-140	491.00
IUUC-Gma-043304	Glycine max	35.37	7.00e-25	107.00
IUUC-Ggo-045589	Gorilla gorilla	62.69	0.00e+00	677.00
IUUC-Hsa-046724	Homo sapiens	62.50	0.00e+00	670.00
IUUC-Hvu-047606	Hordeum vulgare	34.96	3.00e-22	99.00
IUUC-Itr-048186	Ictidomys tridecemlineatus	46.96	9.00e-129	453.00
IUUC-Lch-049873	Latimeria chalumnae	46.34	2.00e-99	355.00
IUUC-Lpe-050854	Leersia perrieri	30.49	1.00e-20	93.60
IUUC-Loc-052575	Lepisosteus oculatus	50.76	7.00e-139	486.00
IUUC-Laf-054417	Loxodonta africana	63.01	0.00e+00	674.00
IUUC-Mcc-055340	Macaca mulatta	63.06	0.00e+00	679.00
IUUC-Meu-056765	Macropus eugenii	47.61	1.00e-81	296.00
IUUC-Mtr-058065	Medicago truncatula	36.18	3.00e-24	105.00
IUUC-Mga-059862	Meleagris gallopavo	65.97	0.00e+00	697.00
IUUC-Mmr-061707	Microcebus murinus	62.62	0.00e+00	659.00
IUUC-Mdo-061966	Monodelphis domestica	60.42	0.00e+00	626.00
IUUC-Mmu-064072	Mus musculus	63.02	0.00e+00	668.00
IUUC-Mac-065151	Musa acuminata	33.33	6.00e-22	97.80
IUUC-Mpu-065680	Mustela putorius furo	63.01	0.00e+00	676.00
IUUC-Mlu-067845	Myotis lucifugus	55.85	2.00e-79	288.00
IUUC-Nle-069867	Nomascus leucogenys	63.06	0.00e+00	681.00
IUUC-Opr-070639	Ochotona princeps	53.78	8.00e-68	250.00
IUUC-Ont-071744	Oreochromis niloticus	47.94	1.00e-138	486.00
IUUC-Oan-073203	Ornithorhynchus anatinus	50.61	2.00e-106	379.00
IUUC-Ocu-074096	Oryctolagus cuniculus	63.20	0.00e+00	672.00
IUUC-Oba-075144	Oryza barthii	36.59	5.00e-23	101.00
IUUC-Obr-076544	Oryza brachyantha	35.77	5.00e-24	104.00
IUUC-Ogl-077518	Oryza glaberrima	36.59	5.00e-23	101.00
IUUC-Ogu-078702	Oryza glumaepatula	36.59	4.00e-23	102.00
IUUC-Oin-079126	Oryza indica	35.05	2.00e-20	93.20
IUUC-Olo-080405	Oryza longistaminata	36.59	3.00e-23	102.00
IUUC-Ome-081659	Oryza meridionalis	36.99	7.00e-23	101.00
IUUC-Oni-082579	Oryza nivara	36.59	5.00e-23	101.00
IUUC-Opu-083235	Oryza punctata	35.77	1.00e-23	103.00
IUUC-Oru-084447	Oryza rufipogon	36.59	5.00e-23	101.00
IUUC-Osa-085737	Oryza sativa	36.59	5.00e-23	101.00
IUUC-Ola-087558	Oryzias latipes	51.83	7.00e-104	370.00
IUUC-Oga-088715	Otolemur garnettii	63.01	0.00e+00	678.00
IUUC-Oar-089570	Ovis aries	88.93	0.00e+00	938.00
IUUC-Ptr-090898	Pan troglodytes	70.37	1.00e-118	419.00
IUUC-Pan-092519	Papio anubis	62.64	0.00e+00	682.00
IUUC-Psi-093065	Pelodiscus sinensis	67.35	0.00e+00	727.00
IUUC-Pma-094267	Petromyzon marinus	58.08	2.00e-173	601.00
IUUC-Ppa-095320	Physcomitrella patens	33.60	2.00e-20	92.80
IUUC-Pfo-096376	Poecilia formosa	65.85	0.00e+00	711.00
IUUC-Pab-098607	Pongo abelii	55.87	5.00e-80	291.00
IUUC-Pop-099752	Populus trichocarpa	35.89	1.00e-24	106.00
IUUC-Pca-100224	Procavia capensis	81.46	0.00e+00	842.00
IUUC-Ppe-101655	Prunus persica	36.18	3.00e-23	102.00
IUUC-Pva-102684	Pteropus vampyrus	45.96	2.00e-121	429.00
IUUC-Rno-104855	Rattus norvegicus	63.95	0.00e+00	665.00
IUUC-Sha-106541	Sarcophilus harrisii	46.90	1.00e-130	459.00
IUUC-Smo-108807	Selaginella moellendorffii	33.60	3.00e-21	95.50
IUUC-Sit-110666	Setaria italica	35.37	2.00e-22	99.80
IUUC-Sly-111212	Solanum lycopersicum	35.77	9.00e-25	107.00
IUUC-Stu-112115	Solanum tuberosum	36.18	1.00e-24	107.00
IUUC-Sbi-114268	Sorghum bicolor	36.18	1.00e-23	103.00
IUUC-Ssc-115580	Sus scrofa	63.78	0.00e+00	663.00
IUUC-Tgu-117459	Taeniopygia guttata	47.28	5.00e-130	457.00
IUUC-Tru-118245	Takifugu rubripes	60.80	6.00e-172	596.00
IUUC-Tsy-119089	Tarsius syrichta	89.35	0.00e+00	944.00
IUUC-Tni-119926	Tetraodon nigroviridis	50.65	1.00e-142	499.00
IUUC-Tca-121637	Theobroma cacao	36.59	7.00e-26	111.00
IUUC-Tae-123659	Triticum aestivum	35.37	7.00e-23	101.00
IUUC-Tur-126194	Triticum urartu	35.37	6.00e-23	101.00
IUUC-Tbe-127814	Tupaia belangeri	57.45	4.00e-93	334.00
IUUC-Ttr-128567	Tursiops truncatus	48.29	2.00e-132	465.00
IUUC-Vpa-130269	Vicugna pacos	48.12	4.00e-131	461.00
IUUC-Vvi-131538	Vitis vinifera	35.37	2.00e-24	106.00
IUUC-Xtr-132921	Xenopus tropicalis	69.72	0.00e+00	728.00
IUUC-Xma-133656	Xiphophorus maculatus	62.78	0.00e+00	651.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence