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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Spo-108355
Ensembl Protein ID SPBC4C3.07.1:pep
UniProt Accession O43060; EIF3F_SCHPO
Genbank Protein ID CAA16829.1
Protein Name Eukaryotic translation initiation factor 3 subunit F
Genbank Nucleotide ID CU329671
Gene Name eif6; eif3f; SPBC4C3.07
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPBC4C3.07 SPBC4C3.07.1 SPBC4C3.07.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexHINT
Post-translational Modifications (PTMs)
dbPAFdbPTM
Protein Expression/Proteomics
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
DUB/JAMM 35.84 3.00e-44 176.00 IUUC-Hsa-046860
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description


     Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
 Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
Protein Sequence
(Fasta)
MALGTKHVLH LTKPSSRSSP LNIVIEPAVL FSILDHSTRK SENNQRVIGT LLGTRSEDGR 60
EIEIKSCFAV PHNESSEQVE VEMEYHRAMY HLHLKANPRE VVVGWYATSP DLDAFSALIQ 120
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Protein Fasta Sequence


>IUUC-Spo-108355|DUB,JAMM|Schizosaccharomyces pombe
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Nucleotide Sequence
(Fasta)
CACTTTCTTA AATGGTAAAC CTTAGAAGTT AGGCGAAAAA TAGTGTCTTC AATTTAACGA 60
ATTCTATGAG ACTGTAAACT AGTACAGTAA AATTATTATT GATTGGGGAA CAATACCAGA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108355|DUB,JAMM|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0597--Phosphoprotein
KW-0648--Protein biosynthesis
KW-1185--Reference proteome
Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C
Pfam

PF01398--JAB
PF13012--MitMem_reg
SMART

SM00232--JAB_MPN
Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0003743--F:translation initiation factor activity
GO:0031369--F:translation initiation factor binding
GO:0002183--P:cytoplasmic translational initiation
GO:0001732--P:formation of cytoplasmic translation initiation complex
KEGG spo:SPBC4C3.07
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001150 Aegilops tauschii 31.31 1.00e-31 128.00
IUUC-Aml-001527 Ailuropoda melanoleuca 35.84 2.00e-46 177.00
IUUC-Atr-002686 Amborella trichopoda 37.98 3.00e-35 140.00
IUUC-Apl-003977 Anas platyrhynchos 34.60 1.00e-39 154.00
IUUC-Aca-004335 Anolis carolinensis 35.82 1.00e-47 181.00
IUUC-Aly-005945 Arabidopsis lyrata 34.78 9.00e-36 141.00
IUUC-Ath-007045 Arabidopsis thaliana 34.42 2.00e-34 137.00
IUUC-Acl-008365 Aspergillus clavatus 51.16 9.00e-93 331.00
IUUC-Afl-008742 Aspergillus flavus 52.15 6.00e-89 318.00
IUUC-Afu-009030 Aspergillus fumigatus 52.48 4.00e-94 335.00
IUUC-Ani-009212 Aspergillus nidulans 53.47 2.00e-94 337.00
IUUC-Ang-009712 Aspergillus niger 52.84 1.00e-93 334.00
IUUC-Aor-009885 Aspergillus oryzae 52.15 2.00e-93 333.00
IUUC-Ate-010315 Aspergillus terreus 53.18 1.00e-88 317.00
IUUC-Ame-010801 Astyanax mexicanus 28.83 2.00e-27 113.00
IUUC-Bgr-011982 Blumeria graminis 45.48 3.00e-81 293.00
IUUC-Bta-012804 Bos taurus 35.84 1.00e-46 178.00
IUUC-Bci-013891 Botrytis cinerea 47.74 6.00e-81 291.00
IUUC-Bdi-014328 Brachypodium distachyon 33.91 2.00e-34 137.00
IUUC-Bol-015446 Brassica oleracea 36.04 5.00e-39 152.00
IUUC-Bra-016862 Brassica rapa 36.36 5.00e-39 152.00
IUUC-Cel-018171 Caenorhabditis elegans 26.19 6.00e-26 108.00
IUUC-Cja-019335 Callithrix jacchus 35.84 2.00e-46 177.00
IUUC-Cfa-020138 Canis familiaris 35.84 2.00e-46 177.00
IUUC-Cpo-022109 Cavia porcellus 34.03 9.00e-39 151.00
IUUC-Cre-022664 Chlamydomonas reinhardtii 34.49 3.00e-44 170.00
IUUC-Csa-023994 Chlorocebus sabaeus 35.84 2.00e-46 177.00
IUUC-Cho-024351 Choloepus hoffmanni 27.24 2.00e-22 97.80
IUUC-Cin-025801 Ciona intestinalis 34.22 3.00e-48 183.00
IUUC-Csv-025805 Ciona savignyi 36.20 8.00e-47 178.00
IUUC-Cgl-026643 Colletotrichum gloeosporioides 44.12 2.00e-74 270.00
IUUC-Cne-026868 Cryptococcus neoformans 35.79 2.00e-43 167.00
IUUC-Cme-027328 Cyanidioschyzon merolae 23.42 7.00e-12 62.40
IUUC-Dre-028085 Danio rerio 36.88 4.00e-48 182.00
IUUC-Dno-030099 Dasypus novemcinctus 36.20 1.00e-46 178.00
IUUC-Dor-030324 Dipodomys ordii 31.54 1.00e-34 138.00
IUUC-Dse-031314 Dothistroma septosporum 49.35 3.00e-89 319.00
IUUC-Dme-031926 Drosophila melanogaster 31.60 4.00e-38 149.00
IUUC-Ete-032569 Echinops telfairi 33.69 4.00e-41 159.00
IUUC-Eca-033502 Equus caballus 34.14 1.00e-42 165.00
IUUC-Eeu-034883 Erinaceus europaeus 25.77 4.00e-13 65.90
IUUC-Fca-035873 Felis catus 35.84 2.00e-46 177.00
IUUC-Fal-036921 Ficedula albicollis 36.20 2.00e-48 183.00
IUUC-Fox-037765 Fusarium oxysporum 43.04 4.00e-69 253.00
IUUC-Fso-038240 Fusarium solani 42.90 5.00e-71 259.00
IUUC-Gmo-038864 Gadus morhua 36.17 3.00e-47 179.00
IUUC-Ggr-039862 Gaeumannomyces graminis 43.45 3.00e-68 249.00
IUUC-Gga-040952 Gallus gallus 36.20 3.00e-48 183.00
IUUC-Gac-041677 Gasterosteus aculeatus 36.43 4.00e-47 179.00
IUUC-Gma-043061 Glycine max 34.64 1.00e-31 128.00
IUUC-Ggo-045591 Gorilla gorilla 35.84 2.00e-46 177.00
IUUC-Hsa-046860 Homo sapiens 35.84 2.00e-46 177.00
IUUC-Hvu-047410 Hordeum vulgare 28.08 9.00e-14 67.40
IUUC-Itr-048211 Ictidomys tridecemlineatus 35.48 5.00e-46 176.00
IUUC-Lch-049410 Latimeria chalumnae 34.38 7.00e-28 114.00
IUUC-Lpe-051102 Leersia perrieri 32.59 4.00e-34 136.00
IUUC-Loc-052016 Lepisosteus oculatus 32.03 2.00e-33 133.00
IUUC-Lma-053157 Leptosphaeria maculans 53.47 4.00e-91 325.00
IUUC-Laf-054568 Loxodonta africana 36.20 1.00e-46 178.00
IUUC-Mcc-054613 Macaca mulatta 35.84 2.00e-46 177.00
IUUC-Meu-056832 Macropus eugenii 30.65 2.00e-14 70.10
IUUC-Mor-057104 Magnaporthe oryzae 43.77 6.00e-73 265.00
IUUC-Mtr-058445 Medicago truncatula 34.00 7.00e-41 158.00
IUUC-Mla-059038 Melampsora laricipopulina 35.91 8.00e-47 178.00
IUUC-Mga-059548 Meleagris gallopavo 34.15 5.00e-41 158.00
IUUC-Mvi-060520 Microbotryum violaceum 36.04 2.00e-38 150.00
IUUC-Mmr-060577 Microcebus murinus 22.30 1.00e-07 48.50
IUUC-Mdo-062376 Monodelphis domestica 35.13 1.00e-46 178.00
IUUC-Mmu-063254 Mus musculus 35.84 3.00e-46 176.00
IUUC-Mac-065635 Musa acuminata 38.43 4.00e-39 152.00
IUUC-Mpu-066314 Mustela putorius furo 35.84 2.00e-46 177.00
IUUC-Mlu-067512 Myotis lucifugus 35.48 9.00e-46 175.00
IUUC-Nfi-068262 Neosartorya fischeri 52.15 1.00e-93 333.00
IUUC-Ncr-068872 Neurospora crassa 43.23 3.00e-68 249.00
IUUC-Nle-070118 Nomascus leucogenys 35.84 2.00e-46 177.00
IUUC-Opr-071228 Ochotona princeps 33.73 1.00e-39 154.00
IUUC-Ont-072600 Oreochromis niloticus 36.52 4.00e-47 179.00
IUUC-Oan-073584 Ornithorhynchus anatinus 33.74 8.00e-40 154.00
IUUC-Ocu-074542 Oryctolagus cuniculus 35.84 1.00e-46 178.00
IUUC-Oba-075923 Oryza barthii 32.61 4.00e-35 139.00
IUUC-Obr-076313 Oryza brachyantha 32.59 1.00e-34 138.00
IUUC-Ogl-076932 Oryza glaberrima 32.61 4.00e-35 139.00
IUUC-Ogu-078152 Oryza glumaepatula 32.61 4.00e-35 139.00
IUUC-Oin-079528 Oryza indica 32.61 4.00e-35 139.00
IUUC-Olo-080401 Oryza longistaminata 32.61 4.00e-35 139.00
IUUC-Ome-081553 Oryza meridionalis 32.25 1.00e-34 138.00
IUUC-Oni-082090 Oryza nivara 32.16 3.00e-35 140.00
IUUC-Opu-083583 Oryza punctata 32.59 5.00e-34 135.00
IUUC-Oru-084492 Oryza rufipogon 32.61 4.00e-35 139.00
IUUC-Osa-085383 Oryza sativa 32.61 4.00e-35 139.00
IUUC-Ola-086835 Oryzias latipes 35.56 1.00e-45 174.00
IUUC-Olu-087716 Ostreococcus lucimarinus 25.18 1.00e-21 94.70
IUUC-Oga-088886 Otolemur garnettii 35.59 1.00e-46 178.00
IUUC-Oar-090079 Ovis aries 35.84 8.00e-47 178.00
IUUC-Ptr-091457 Pan troglodytes 35.84 2.00e-46 177.00
IUUC-Pan-092317 Papio anubis 30.81 7.00e-21 91.70
IUUC-Psi-093129 Pelodiscus sinensis 33.74 2.00e-40 157.00
IUUC-Pma-094488 Petromyzon marinus 33.57 6.00e-45 172.00
IUUC-Pno-095049 Phaeosphaeria nodorum 51.51 7.00e-90 321.00
IUUC-Ppa-095341 Physcomitrella patens 34.45 3.00e-45 173.00
IUUC-Pfo-096286 Poecilia formosa 36.17 5.00e-47 179.00
IUUC-Pab-097765 Pongo abelii 35.84 2.00e-46 177.00
IUUC-Pop-099131 Populus trichocarpa 34.74 2.00e-38 150.00
IUUC-Pca-100524 Procavia capensis 27.24 9.00e-22 94.70
IUUC-Ppe-101934 Prunus persica 35.51 7.00e-41 158.00
IUUC-Pva-102577 Pteropus vampyrus 36.20 8.00e-47 178.00
IUUC-Pgr-103521 Puccinia graminis 35.45 3.00e-47 180.00
IUUC-Pte-104304 Pyrenophora teres 51.97 6.00e-91 325.00
IUUC-Pyt-104563 Pyrenophora triticirepentis 51.97 2.00e-91 326.00
IUUC-Rno-105717 Rattus norvegicus 35.84 2.00e-46 177.00
IUUC-Sha-107190 Sarcophilus harrisii 35.27 1.00e-45 174.00
IUUC-Sja-107918 Schizosaccharomyces japonicus 75.08 2.00e-142 496.00
IUUC-Smo-109374 Selaginella moellendorffii 41.96 1.00e-53 201.00
IUUC-Sit-110119 Setaria italica 32.97 2.00e-35 140.00
IUUC-Sly-111570 Solanum lycopersicum 32.43 2.00e-29 120.00
IUUC-Stu-112308 Solanum tuberosum 34.19 4.00e-35 139.00
IUUC-Sbi-114605 Sorghum bicolor 32.25 1.00e-34 138.00
IUUC-Sre-114906 Sporisorium reilianum 44.77 5.00e-64 235.00
IUUC-Tgu-117087 Taeniopygia guttata 33.87 3.00e-40 156.00
IUUC-Tru-117700 Takifugu rubripes 36.52 4.00e-47 179.00
IUUC-Tni-120470 Tetraodon nigroviridis 36.88 6.00e-48 182.00
IUUC-Tca-121109 Theobroma cacao 35.33 2.00e-33 134.00
IUUC-Tre-122095 Trichoderma reesei 44.05 4.00e-71 259.00
IUUC-Tvi-122580 Trichoderma virens 44.37 7.00e-72 261.00
IUUC-Tae-125129 Triticum aestivum 32.13 7.00e-34 135.00
IUUC-Tur-126658 Triticum urartu 28.32 1.00e-26 111.00
IUUC-Tme-127043 Tuber melanosporum 52.00 2.00e-92 330.00
IUUC-Tbe-127927 Tupaia belangeri 35.84 2.00e-46 177.00
IUUC-Ttr-129231 Tursiops truncatus 35.84 9.00e-47 178.00
IUUC-Uma-129578 Ustilago maydis 44.12 6.00e-64 235.00
IUUC-Vda-129730 Verticillium dahliae 44.52 2.00e-78 283.00
IUUC-Vpa-130606 Vicugna pacos 28.16 8.00e-06 42.00
IUUC-Vvi-130968 Vitis vinifera 35.19 6.00e-36 142.00
IUUC-Xtr-132203 Xenopus tropicalis 36.30 7.00e-47 178.00
IUUC-Xma-133972 Xiphophorus maculatus 36.17 8.00e-47 178.00
IUUC-Yli-134553 Yarrowia lipolytica 41.58 6.00e-60 222.00
IUUC-Zma-134941 Zea mays 31.77 2.00e-29 120.00
Created Date 25-Jun-2017

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