iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095978

Ensembl Protein ID

PP1S262_27V6.1

UniProt Accession

A9TLZ3; A9TLZ3_PHYPA

Genbank Protein ID

EDQ55560.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545151

Gene Name

PHYPADRAFT_147516

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S262_27V6	PP1S262_27V6.1	PP1S262_27V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.10e-08	35.9	196	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C  Cg ++  ++  + C++C++wfH +C+k++     +  +++ Cp+C++
   Q: 196  TFCGSCGGPYTADEFWIGCDICEKWFHGKCVKIT-PARAEHIKQYKCPSCSN 246
           79********************************.666666677******86 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MEGGSMTLNP RSVDEVFKDF KGRRSGMLKA LTTDVEEFYL QCDPEKENLC LYGFPDEAWE 60
VNLPAEEVPP ELPEPALGIN FARDGMQRKD WLSLVAVHSD AWLLAVAFYY GARFDKNERK 120

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Nucleotide Sequence
(Fasta)

GCATGAGGAG TTTCCGGCAC ACACACTTGG TAGCGCTGGG TCAGGGTTTT AGCTCGTCGT 60
GAGGACTAGG GTTTGTGAAA ACTTAGCGGG TGCGTCAATT CGAAGATGCG AAGCCCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

ppp:PHYPADRAFT_147516

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-043950	Glycine max	66.53	1.00e-77	281.00
IUUC-Mac-064462	Musa acuminata	63.60	3.00e-83	300.00
IUUC-Olo-080963	Oryza longistaminata	46.15	7.00e-34	136.00
IUUC-Oru-085108	Oryza rufipogon	61.22	5.00e-72	263.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence