iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112437

Ensembl Protein ID

PGSC0003DMT400015610

UniProt Accession

M1A6A1; M1A6A1_SOLTU

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400006093	PGSC0003DMT400015610	PGSC0003DMT400015610

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.70e-16	61.4	122	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkav 67
           +vkv+++g+++++++dl+ + ++++L +a+++ +                         l+ se+ ++YeD+dGD++ l++D++++++v
   Q: 122  FVKVCMDGAPYLRKVDLKMYKSYQELSDALAKmFSsftngnygsqgmidfmnesklmdLLNSSEYVPTYEDKDGDWM-LVGDVPWEMFV 209
           8*******************************62256699*****************88888***************.*********** PP
   S: 68   sllaskksllrlliqk 83
           +      s++rl+i+k
   Q: 210  D------SCKRLRIMK 219
           *......********8 PP

Organism

Solanum tuberosum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MDLKETELCL GLPGGGGGGG GGGELIRDNN NNNKINGKRG FSETVDLKLN FHQANDDISC 60
AMENNKMKNS VTTTKEVVCN KDPIKPPAKA QVVGWPPVRS FRKNVMAQKS NTEESEKTTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTGTTGCT ATTACTTATA TTACTTTTGC ATTTTCTCTC TCAATATTTT TTTCCCTTTC 60
TCTCTCTTTT TAATATTTGC ATAGTACTAC TACTACATAT TGAAGAAAAT TATTGAAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sot:102593208

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005852	Arabidopsis lyrata	66.94	3.00e-83	299.00
IUUC-Ath-006734	Arabidopsis thaliana	64.54	3.00e-83	300.00
IUUC-Bol-015767	Brassica oleracea	64.63	3.00e-82	296.00
IUUC-Bra-017555	Brassica rapa	65.04	9.00e-83	298.00
IUUC-Gma-043268	Glycine max	75.10	2.00e-93	333.00
IUUC-Itr-047962	Ictidomys tridecemlineatus	23.53	6.00e-03	34.70
IUUC-Lpe-050724	Leersia perrieri	50.88	2.00e-47	180.00
IUUC-Mtr-058575	Medicago truncatula	71.24	9.00e-82	295.00
IUUC-Mac-065450	Musa acuminata	68.22	1.00e-75	274.00
IUUC-Pop-099950	Populus trichocarpa	72.65	6.00e-95	338.00
IUUC-Ppe-101719	Prunus persica	69.96	1.00e-87	314.00
IUUC-Sly-111331	Solanum lycopersicum	94.98	1.00e-120	423.00
IUUC-Tca-121826	Theobroma cacao	74.18	4.00e-93	332.00
IUUC-Tre-122196	Trichoderma reesei	36.00	1.50e-01	30.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence