iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131523

Ensembl Protein ID

VIT_05s0020g04690.t01

UniProt Accession

F6HDY1; F6HDY1_VITVI

Genbank Protein ID

CCB50496.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

FN595749

Gene Name

VIT_05s0020g04690

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_05s0020g04690	VIT_05s0020g04690.t01	VIT_05s0020g04690.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.00e-16	59.9	127	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldka 66
           +vkv+++g+++++++dl+ + ++++L +a+ + +                         l+ se+ ++YeD+dGD++ l++D++++++
   Q: 127  FVKVCMDGAPYLRKVDLKMYKSYQELSDALGKmFSsftmgnygaqgmidfmnesklmdLLNSSEYVPTYEDKDGDWM-LVGDVPWEMF 213
           8*******************************62256699*****************88888***************.********** PP
   S: 67   vsllaskksllrlliqk 83
           v+      s++rl+i+k
   Q: 214  VD------SCKRLRIMK 224
           **......********8 PP

Organism

Vitis vinifera

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MEVGRKMSSM LGAERGFDFK ETELCLGLPG GGGGEAETLK ASGKRGFSET VDLKLNLQSK 60
ESVVDLNENV KCPPKEKNLL PCTKDPAKPP AKAQVVGWPP VRSFRKNIMA QKNSSEEGEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCAAGAAGA AGAGTAGGGA GAAAGAGGAA GAAGGAGAAG CAAAGAGAGA AGATAGCCAT 60
CATCATCAAC GACTAGAATA GAGCAAGGTT TCCCCGGAGA TTCCATGGAA GTTGGCCGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

vvi:100254530

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005642	Arabidopsis lyrata	75.83	1.00e-82	298.00
IUUC-Ath-006734	Arabidopsis thaliana	76.89	2.00e-84	304.00
IUUC-Bol-015767	Brassica oleracea	77.29	5.00e-83	299.00
IUUC-Bra-017171	Brassica rapa	79.15	1.00e-87	314.00
IUUC-Gma-043268	Glycine max	75.40	6.00e-97	345.00
IUUC-Hvu-047087	Hordeum vulgare	80.00	4.00e-68	248.00
IUUC-Lpe-050724	Leersia perrieri	49.56	2.00e-46	177.00
IUUC-Mtr-058575	Medicago truncatula	75.00	8.00e-84	301.00
IUUC-Mac-065450	Musa acuminata	69.86	3.00e-77	280.00
IUUC-Ogu-078911	Oryza glumaepatula	57.32	5.00e-69	253.00
IUUC-Ppa-095740	Physcomitrella patens	43.71	2.00e-33	136.00
IUUC-Pop-099950	Populus trichocarpa	79.59	2.00e-105	374.00
IUUC-Ppe-101719	Prunus persica	81.74	7.00e-99	352.00
IUUC-Sit-110063	Setaria italica	63.25	3.00e-74	270.00
IUUC-Sly-111331	Solanum lycopersicum	79.13	7.00e-93	332.00
IUUC-Stu-112437	Solanum tuberosum	76.59	1.00e-88	318.00
IUUC-Tca-121826	Theobroma cacao	81.42	5.00e-110	389.00
IUUC-Tre-122196	Trichoderma reesei	36.00	2.80e-01	29.60

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence