iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s14810	POPTR_0003s14810.1	POPTR_0003s14810.1
POPTR_0003s14810	POPTR_0003s14810.3	POPTR_0003s14810.3
POPTR_0003s14810	POPTR_0003s14810.4	POPTR_0003s14810.4
POPTR_0003s14810	POPTR_0003s14810.2	POPTR_0003s14810.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.70e-09	37.5	190	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC++++k+   ++ CgHvf+++C++k          + +CP+Cr
   Q: 190  CPICMDEMKE-ATSTKCGHVFCKSCIEKA------LAVQKKCPTCR 228
           ********99.888************888......899999****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDLLENFDSN MVFMEKAENT MDLLGSVDLL VENLWEAERS YYQHFDLNFP VPVENNIPPC 60
GPWFPAQPQI FQAEAYGLTR QRGTARDVEV IDDDIAIISP NTFDQARKKA RRNPDAEVRE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAAAAAG CAAATCCTAT TCAAACAGTA TTTATATATC TAGAGAGCCG AGACGTCTAA 60
TTATCATGAA TGATCAAATA ATTAATTAGT TAAGCAAGCA GCAGTTATGG CACATGCGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0003s14810g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002771	Amborella trichopoda	31.29	2.00e-19	88.20
IUUC-Csv-026318	Ciona savignyi	41.54	5.00e-11	60.50
IUUC-Dre-027528	Danio rerio	58.54	7.00e-10	57.80
IUUC-Dor-030898	Dipodomys ordii	36.14	4.00e-10	57.80
IUUC-Dme-032177	Drosophila melanogaster	52.63	3.00e-14	72.00
IUUC-Gac-041788	Gasterosteus aculeatus	51.22	1.00e-08	53.10
IUUC-Loc-052211	Lepisosteus oculatus	48.78	5.00e-09	54.70
IUUC-Ont-072659	Oreochromis niloticus	51.22	1.00e-08	53.50
IUUC-Ppa-095498	Physcomitrella patens	61.54	3.00e-17	81.30
IUUC-Ppe-101388	Prunus persica	35.75	6.00e-21	93.20
IUUC-Smo-109339	Selaginella moellendorffii	50.00	2.00e-13	68.60
IUUC-Tru-118523	Takifugu rubripes	55.00	8.00e-09	53.50
IUUC-Tae-124312	Triticum aestivum	48.61	5.00e-17	80.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence