iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112663

Ensembl Protein ID

PGSC0003DMT400030318

UniProt Accession

M1AU25; M1AU25_SOLTU

Protein Name

Ubiquitin-like protein ATG12

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400011604	PGSC0003DMT400030318	PGSC0003DMT400030318

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UBL/ATG12	53.49	1.00e-08	55.50	IUUC-Hsa-046903

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum tuberosum

Functional Description
(View)

Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.

Protein Sequence
(Fasta)

MQVTVGDYCW LERKGFGFRQ LLPEKWASAV LESRKEKVHW ETCLGVNPQT KHACNPMEKV 60
WMFHYDERHK MFVYVNSAFS PNPDELVIDL YNNFGFDGKL VVNYACSMAW G 111

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAAGTCA CAGTGGGTGA TTATTGTTGG CTTGAAAGAA AGGGGTTTGG ATTCCGGCAG 60
CTCCTACCGG AAAAGTGGGC TTCTGCAGTC CTAGAAAGTA GGAAAGAGAA AGTTCATTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR007242--Atg12
IPR029071--Ubiquitin-rel_dom

Pfam

PF04110--APG12

Gene Ontology

GO:0005737--C:cytoplasm
GO:0000045--P:autophagosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001177	Aegilops tauschii	80.49	4.00e-17	77.80
IUUC-Aml-002116	Ailuropoda melanoleuca	53.49	9.00e-10	55.10
IUUC-Atr-002615	Amborella trichopoda	90.91	6.00e-21	90.90
IUUC-Apl-003753	Anas platyrhynchos	55.00	5.00e-09	50.80
IUUC-Aca-005231	Anolis carolinensis	53.49	5.00e-10	55.50
IUUC-Aly-006172	Arabidopsis lyrata	95.12	5.00e-20	87.40
IUUC-Ath-006953	Arabidopsis thaliana	92.86	6.00e-20	87.40
IUUC-Ago-007970	Ashbya gossypii	36.84	2.00e-03	34.30
IUUC-Acl-008072	Aspergillus clavatus	40.00	9.00e-05	37.40
IUUC-Afl-008725	Aspergillus flavus	42.22	1.00e-04	38.10
IUUC-Afu-008967	Aspergillus fumigatus	40.00	4.00e-04	36.60
IUUC-Ani-009248	Aspergillus nidulans	37.78	3.00e-03	33.50
IUUC-Ang-009684	Aspergillus niger	42.22	4.00e-04	36.60
IUUC-Aor-009947	Aspergillus oryzae	42.22	1.00e-04	38.10
IUUC-Ame-011656	Astyanax mexicanus	51.16	2.00e-09	53.10
IUUC-Bgr-012174	Blumeria graminis	41.86	1.20e-02	30.80
IUUC-Bta-012483	Bos taurus	53.49	6.00e-10	55.10
IUUC-Bci-013755	Botrytis cinerea	44.68	9.00e-05	37.70
IUUC-Bdi-014156	Brachypodium distachyon	54.74	6.00e-19	84.00
IUUC-Bol-015683	Brassica oleracea	55.29	1.00e-17	79.70
IUUC-Bra-016802	Brassica rapa	56.47	1.00e-19	85.90
IUUC-Cja-019514	Callithrix jacchus	53.49	1.00e-09	55.10
IUUC-Cfa-020748	Canis familiaris	53.49	5.00e-10	55.80
IUUC-Cpo-021965	Cavia porcellus	53.49	9.00e-10	55.10
IUUC-Cre-023009	Chlamydomonas reinhardtii	43.90	2.00e-05	38.90
IUUC-Csa-023494	Chlorocebus sabaeus	53.49	6.00e-10	55.10
IUUC-Cho-024631	Choloepus hoffmanni	53.49	1.00e-09	55.10
IUUC-Cin-025609	Ciona intestinalis	44.00	3.00e-09	52.00
IUUC-Cgl-026722	Colletotrichum gloeosporioides	41.30	8.00e-05	38.50
IUUC-Dre-027479	Danio rerio	52.38	3.00e-09	52.80
IUUC-Dno-029693	Dasypus novemcinctus	57.50	3.00e-09	53.10
IUUC-Dse-031440	Dothistroma septosporum	42.22	6.00e-05	38.90
IUUC-Dme-031892	Drosophila melanogaster	40.82	2.00e-08	49.30
IUUC-Ete-032550	Echinops telfairi	54.76	6.00e-10	54.70
IUUC-Eca-033553	Equus caballus	53.49	6.00e-10	55.50
IUUC-Fca-036524	Felis catus	54.76	7.00e-10	55.50
IUUC-Fal-036942	Ficedula albicollis	51.16	8.00e-10	53.50
IUUC-Fox-037753	Fusarium oxysporum	45.65	3.00e-05	40.00
IUUC-Gmo-039498	Gadus morhua	48.08	3.00e-10	56.20
IUUC-Ggr-039852	Gaeumannomyces graminis	38.64	3.00e-03	33.90
IUUC-Gga-041263	Gallus gallus	53.49	5.00e-10	55.80
IUUC-Gac-042346	Gasterosteus aculeatus	47.83	9.00e-10	54.30
IUUC-Gma-042896	Glycine max	90.91	4.00e-21	91.30
IUUC-Ggo-045601	Gorilla gorilla	53.49	9.00e-10	55.50
IUUC-Hsa-046903	Homo sapiens	53.49	6.00e-10	55.50
IUUC-Hvu-047239	Hordeum vulgare	82.93	4.00e-17	77.80
IUUC-Itr-048445	Ictidomys tridecemlineatus	53.49	8.00e-10	55.10
IUUC-Kpa-049355	Komagataella pastoris	42.86	6.00e-07	45.40
IUUC-Lch-050619	Latimeria chalumnae	48.98	1.00e-10	57.80
IUUC-Loc-052102	Lepisosteus oculatus	41.67	1.30e-02	29.60
IUUC-Laf-054205	Loxodonta africana	53.49	5.00e-10	55.50
IUUC-Meu-056804	Macropus eugenii	53.49	9.00e-10	54.70
IUUC-Mor-057052	Magnaporthe oryzae	38.64	1.00e-03	35.00
IUUC-Mtr-057961	Medicago truncatula	93.18	1.00e-21	92.80
IUUC-Mla-059045	Melampsora laricipopulina	40.62	2.00e-10	55.80
IUUC-Mga-059934	Meleagris gallopavo	73.33	5.00e+00	26.20
IUUC-Mvi-060360	Microbotryum violaceum	40.62	8.00e-10	54.70
IUUC-Mmr-061654	Microcebus murinus	53.49	5.00e-10	55.10
IUUC-Mdo-062649	Monodelphis domestica	53.49	8.00e-10	55.10
IUUC-Mmu-064105	Mus musculus	53.49	8.00e-10	54.70
IUUC-Mac-065532	Musa acuminata	58.14	5.00e-21	90.90
IUUC-Mpu-066269	Mustela putorius furo	53.49	5.00e-10	55.50
IUUC-Mlu-067631	Myotis lucifugus	53.49	9.00e-10	55.10
IUUC-Nfi-068468	Neosartorya fischeri	40.00	1.00e-04	37.00
IUUC-Nle-069483	Nomascus leucogenys	53.49	8.00e-10	55.50
IUUC-Opr-070936	Ochotona princeps	53.49	1.00e-09	55.10
IUUC-Obr-076322	Oryza brachyantha	51.65	1.00e-19	86.30
IUUC-Ogl-077226	Oryza glaberrima	85.37	4.00e-18	81.30
IUUC-Oin-079220	Oryza indica	85.37	2.00e-17	79.30
IUUC-Olo-080688	Oryza longistaminata	85.37	4.00e-18	81.30
IUUC-Ome-081265	Oryza meridionalis	85.37	4.00e-18	81.30
IUUC-Oru-084342	Oryza rufipogon	52.27	3.00e-18	84.00
IUUC-Osa-086212	Oryza sativa	85.37	4.00e-18	81.30
IUUC-Ola-087277	Oryzias latipes	46.94	4.00e-10	55.10
IUUC-Olu-087780	Ostreococcus lucimarinus	36.73	4.00e-04	35.00
IUUC-Oga-088175	Otolemur garnettii	53.49	5.00e-10	55.50
IUUC-Oar-089477	Ovis aries	53.49	8.00e-10	55.10
IUUC-Ptr-091129	Pan troglodytes	53.49	9.00e-10	55.50
IUUC-Psi-093351	Pelodiscus sinensis	53.49	4.00e-10	55.80
IUUC-Ppa-095788	Physcomitrella patens	72.73	1.00e-16	76.60
IUUC-Pfo-096993	Poecilia formosa	42.86	1.00e-08	50.40
IUUC-Pab-098502	Pongo abelii	53.49	9.00e-10	55.50
IUUC-Pop-098819	Populus trichocarpa	81.82	2.00e-19	85.50
IUUC-Pca-100144	Procavia capensis	66.67	5.80e-02	29.30
IUUC-Ppe-101560	Prunus persica	93.18	3.00e-21	91.30
IUUC-Pva-102810	Pteropus vampyrus	45.83	9.00e-03	31.60
IUUC-Pgr-103531	Puccinia graminis	53.66	3.00e-10	55.80
IUUC-Ptt-103753	Puccinia triticina	53.66	4.00e-10	55.10
IUUC-Pyt-104733	Pyrenophora triticirepentis	46.67	1.00e-04	37.70
IUUC-Rno-106072	Rattus norvegicus	53.49	8.00e-10	54.70
IUUC-Sce-106275	Saccharomyces cerevisiae	31.71	4.00e-04	36.60
IUUC-Sha-107554	Sarcophilus harrisii	53.49	6.00e-10	55.50
IUUC-Sja-107682	Schizosaccharomyces japonicus	27.36	2.00e-05	40.40
IUUC-Spo-108275	Schizosaccharomyces pombe	40.00	5.00e-10	55.10
IUUC-Smo-109151	Selaginella moellendorffii	53.33	1.00e-10	56.60
IUUC-Sit-110270	Setaria italica	72.73	9.00e-19	83.20
IUUC-Sly-111862	Solanum lycopersicum	60.23	3.00e-22	94.70
IUUC-Sbi-114148	Sorghum bicolor	72.73	9.00e-19	83.20
IUUC-Sre-115216	Sporisorium reilianum	37.50	1.00e-09	53.90
IUUC-Ssc-116051	Sus scrofa	53.49	6.00e-10	55.10
IUUC-Tru-118466	Takifugu rubripes	46.94	7.00e-10	53.90
IUUC-Tsy-119334	Tarsius syrichta	51.16	7.00e-06	42.40
IUUC-Tni-119792	Tetraodon nigroviridis	46.94	3.00e-10	55.10
IUUC-Tca-121861	Theobroma cacao	60.47	2.00e-21	93.20
IUUC-Tvi-122499	Trichoderma virens	41.30	3.00e-04	36.20
IUUC-Tae-123431	Triticum aestivum	80.49	4.00e-17	77.80
IUUC-Tme-126934	Tuber melanosporum	46.34	3.00e-05	39.70
IUUC-Ttr-129001	Tursiops truncatus	52.50	1.00e-07	48.50
IUUC-Uma-129324	Ustilago maydis	39.06	8.00e-10	54.70
IUUC-Vda-129846	Verticillium dahliae	42.86	4.00e-04	35.80
IUUC-Vpa-130202	Vicugna pacos	57.50	2.00e-09	54.30
IUUC-Vvi-131474	Vitis vinifera	50.00	2.00e-10	57.00
IUUC-Xtr-132782	Xenopus tropicalis	48.98	3.00e-10	56.20
IUUC-Xma-134140	Xiphophorus maculatus	44.90	3.00e-09	53.10
IUUC-Yli-134517	Yarrowia lipolytica	30.91	2.00e-04	38.10
IUUC-Zma-134764	Zea mays	72.73	9.00e-19	83.20

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence