iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__1623__AT2G35930.1	fgenesh2_kg.4__1623__AT2G35930.1	fgenesh2_kg.4__1623__AT2G35930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.90e-33	114.4	6	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqpl.teedlvPnltlrrliqawceens 73
           e+p++flCpIsle+M+dPv++++Gitydr sIekwl  g+k +cPvt+q + t+ dl+Pn+tlrrliq+wc  n+
   Q: 6    EIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKnSCPVTKQDIiTDADLTPNHTLRRLIQSWCTLNA 80
           69**********************************888888********99*******************9876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDEEIEIPPF FLCPISLEIM KDPVIVSTGI TYDRDSIEKW LFAGKKNSCP VTKQDIITDA 60
DLTPNHTLRR LIQSWCTLNA SYGVERIPTP RPPICKSEIE KLIRDSASSH QNQVKSLKRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAACTTATT CAAACCAATT CACATCTTCC CAAACCCAAC TACTACAACT TGTAGCAAGA 60
AAAAATATAT TCTTTAGCTT CTTTGATCAA TATATTCATC TGGGTTCTCG TCAAATATAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0005829--C:cytosol
GO:0004842--F:ubiquitin-protein transferase activity
GO:0051865--P:protein autoubiquitination
GO:0010200--P:response to chitin
GO:0009414--P:response to water deprivation

KEGG

aly:ARALYDRAFT_482563

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000639	Aegilops tauschii	46.03	7.00e-85	306.00
IUUC-Atr-002430	Amborella trichopoda	45.45	4.00e-101	360.00
IUUC-Ath-007471	Arabidopsis thaliana	96.56	0.00e+00	751.00
IUUC-Bdi-014627	Brachypodium distachyon	43.75	2.00e-86	311.00
IUUC-Bol-015782	Brassica oleracea	89.95	0.00e+00	705.00
IUUC-Bra-016841	Brassica rapa	90.05	0.00e+00	731.00
IUUC-Hvu-047293	Hordeum vulgare	46.47	6.00e-88	317.00
IUUC-Lpe-051695	Leersia perrieri	40.65	8.00e-67	246.00
IUUC-Mac-064467	Musa acuminata	45.92	5.00e-92	330.00
IUUC-Oba-075095	Oryza barthii	42.93	3.00e-78	285.00
IUUC-Obr-076623	Oryza brachyantha	41.32	4.00e-51	194.00
IUUC-Ogl-077664	Oryza glaberrima	45.30	2.00e-81	295.00
IUUC-Ogu-079030	Oryza glumaepatula	42.69	3.00e-71	261.00
IUUC-Oin-079734	Oryza indica	42.69	3.00e-71	261.00
IUUC-Ome-081839	Oryza meridionalis	45.34	3.00e-89	321.00
IUUC-Oni-082818	Oryza nivara	42.24	8.00e-73	266.00
IUUC-Opu-084067	Oryza punctata	45.99	2.00e-97	348.00
IUUC-Oru-085239	Oryza rufipogon	42.69	3.00e-71	261.00
IUUC-Osa-086041	Oryza sativa	42.69	3.00e-71	261.00
IUUC-Ppa-095659	Physcomitrella patens	33.82	3.00e-61	228.00
IUUC-Ppe-102059	Prunus persica	56.97	1.00e-142	498.00
IUUC-Sit-110571	Setaria italica	43.26	2.00e-91	328.00
IUUC-Sly-111579	Solanum lycopersicum	55.34	5.00e-126	443.00
IUUC-Stu-112238	Solanum tuberosum	55.85	7.00e-139	486.00
IUUC-Sbi-114243	Sorghum bicolor	45.67	2.00e-88	318.00
IUUC-Tca-121107	Theobroma cacao	62.50	9.00e-153	532.00
IUUC-Tae-124810	Triticum aestivum	44.81	8.00e-96	343.00
IUUC-Vvi-131052	Vitis vinifera	58.17	1.00e-140	491.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence