iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
CPLM	dbPAF	dbPTM	UniProt
BioGRID
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box	F-box	18678868; 14747994

Reviewed

Classification

Family	Identity	E-value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	35.99	8.00e-50	193.00	IUUC-Spo-108161

Organism

Saccharomyces cerevisiae

Functional Description
(View)

Involved in recycling plasma membrane proteins internalized by endocytosis. Required for recycling of the v-SNARE SNC1.

Protein Sequence
(Fasta)

MDDLLKVPEI VTNIASYLST VDYLSFQQVN KRVYAIINGK NDSKYWSLKL TRMGLQQVHS 60
NEEEEITLLD ENDNQNSLRI FEIYKSFTAQ NSKKIFVKFY RCYNSYARKL YNNNLANFFP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGATC TGCTAAAAGT TCCCGAGATT GTAACCAATA TTGCCTCATA TTTATCTACT 60
GTAGATTATC TGAGTTTTCA ACAAGTGAAT AAACGGGTTT ATGCAATCAT TAACGGCAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0597--Phosphoprotein
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport

Interpro

IPR032675--L_dom-like
IPR009976--Sec10-like

Pfam

PF07393--Sec10

Gene Ontology

GO:0051286--C:cell tip
GO:0005935--C:cellular bud neck
GO:0005829--C:cytosol
GO:0005768--C:endosome
GO:0000145--C:exocyst
GO:0005794--C:Golgi apparatus
GO:0030427--C:site of polarized growth
GO:0000149--F:SNARE binding
GO:0034498--P:early endosome to Golgi transport
GO:0032456--P:endocytic recycling
GO:0006897--P:endocytosis
GO:0006887--P:exocytosis
GO:0006893--P:Golgi to plasma membrane transport
GO:0015031--P:protein transport
GO:0048278--P:vesicle docking

KEGG

sce:YJL204C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001647	Ailuropoda melanoleuca	38.24	1.60e-01	28.50
IUUC-Ago-007887	Ashbya gossypii	38.56	1.00e-164	571.00
IUUC-Acl-008127	Aspergillus clavatus	37.29	1.00e-62	233.00
IUUC-Afl-008700	Aspergillus flavus	37.50	9.00e-67	246.00
IUUC-Afu-008801	Aspergillus fumigatus	37.33	4.00e-66	244.00
IUUC-Ani-009200	Aspergillus nidulans	37.33	1.00e-69	256.00
IUUC-Ang-009657	Aspergillus niger	37.06	8.00e-70	256.00
IUUC-Aor-009985	Aspergillus oryzae	37.50	8.00e-67	246.00
IUUC-Ate-010451	Aspergillus terreus	36.78	5.00e-69	254.00
IUUC-Bgr-012181	Blumeria graminis	29.73	6.00e-80	290.00
IUUC-Bci-013997	Botrytis cinerea	29.54	1.00e-77	282.00
IUUC-Bra-016778	Brassica rapa	30.77	1.10e-02	32.00
IUUC-Cho-024956	Choloepus hoffmanni	37.84	9.80e-01	29.60
IUUC-Cin-025352	Ciona intestinalis	18.64	3.00e-09	55.10
IUUC-Csv-025850	Ciona savignyi	21.36	5.00e-11	60.80
IUUC-Cgl-026626	Colletotrichum gloeosporioides	39.07	1.00e-74	272.00
IUUC-Cne-027003	Cryptococcus neoformans	36.10	1.00e-59	223.00
IUUC-Cme-027306	Cyanidioschyzon merolae	26.92	4.30e-01	26.20
IUUC-Dor-030550	Dipodomys ordii	55.00	2.80e+00	27.70
IUUC-Dse-031453	Dothistroma septosporum	36.84	2.00e-74	271.00
IUUC-Eeu-035136	Erinaceus europaeus	55.00	3.00e+00	27.70
IUUC-Fca-036200	Felis catus	38.24	5.80e-02	30.00
IUUC-Fox-037910	Fusarium oxysporum	31.13	5.00e-15	74.30
IUUC-Fso-038397	Fusarium solani	35.37	3.00e-70	258.00
IUUC-Ggr-039829	Gaeumannomyces graminis	36.04	1.00e-75	275.00
IUUC-Ggo-044995	Gorilla gorilla	19.89	5.00e-04	37.70
IUUC-Itr-048244	Ictidomys tridecemlineatus	35.00	2.10e-01	30.40
IUUC-Kpa-049253	Komagataella pastoris	39.72	2.00e-70	258.00
IUUC-Lma-053244	Leptosphaeria maculans	35.31	6.00e-59	220.00
IUUC-Mcc-054675	Macaca mulatta	19.94	1.00e-05	42.70
IUUC-Mor-057138	Magnaporthe oryzae	37.99	5.00e-75	273.00
IUUC-Mpo-057323	Magnaporthe poae	36.13	4.00e-74	271.00
IUUC-Mtr-058449	Medicago truncatula	30.16	3.70e-02	30.40
IUUC-Mla-059111	Melampsora laricipopulina	36.84	8.00e-48	183.00
IUUC-Mvi-060552	Microbotryum violaceum	38.51	6.00e-63	234.00
IUUC-Mmr-060650	Microcebus murinus	19.94	2.00e-05	42.40
IUUC-Mdo-062303	Monodelphis domestica	19.94	4.00e-08	50.80
IUUC-Mmu-064214	Mus musculus	19.94	3.00e-05	41.60
IUUC-Mpu-066883	Mustela putorius furo	38.24	7.40e-02	29.60
IUUC-Nfi-068598	Neosartorya fischeri	36.78	1.00e-65	242.00
IUUC-Ncr-068933	Neurospora crassa	45.00	2.00e-34	139.00
IUUC-Ogl-077785	Oryza glaberrima	37.50	9.00e-03	32.70
IUUC-Ogu-079009	Oryza glumaepatula	37.50	3.60e-02	31.60
IUUC-Olo-080399	Oryza longistaminata	26.73	7.00e-03	33.50
IUUC-Ome-081827	Oryza meridionalis	26.73	1.10e-02	33.10
IUUC-Oni-082626	Oryza nivara	26.73	1.20e-02	32.70
IUUC-Opu-084110	Oryza punctata	24.18	2.00e-02	32.00
IUUC-Pma-094191	Petromyzon marinus	39.53	4.00e-03	32.30
IUUC-Pno-094857	Phaeosphaeria nodorum	36.24	6.00e-63	233.00
IUUC-Pop-098985	Populus trichocarpa	29.07	3.00e-02	31.20
IUUC-Pca-100694	Procavia capensis	24.11	5.00e-05	41.20
IUUC-Pgr-103271	Puccinia graminis	24.21	2.00e-20	92.80
IUUC-Ptt-103902	Puccinia triticina	26.90	8.00e-15	73.90
IUUC-Pte-104077	Pyrenophora teres	37.06	6.00e-64	236.00
IUUC-Pyt-104478	Pyrenophora triticirepentis	37.06	6.00e-64	237.00
IUUC-Sja-107898	Schizosaccharomyces japonicus	32.43	5.00e-56	210.00
IUUC-Spo-108161	Schizosaccharomyces pombe	29.17	3.00e-54	204.00
IUUC-Ssl-108404	Sclerotinia sclerotiorum	29.81	2.00e-82	298.00
IUUC-Sre-115132	Sporisorium reilianum	32.30	5.00e-47	181.00
IUUC-Tru-117584	Takifugu rubripes	38.24	6.30e-02	30.00
IUUC-Tre-122147	Trichoderma reesei	38.87	2.00e-72	265.00
IUUC-Tvi-122469	Trichoderma virens	36.95	7.00e-74	270.00
IUUC-Tme-127136	Tuber melanosporum	29.59	1.00e-83	302.00
IUUC-Uma-129413	Ustilago maydis	33.33	2.00e-45	176.00
IUUC-Vda-130022	Verticillium dahliae	36.57	7.00e-70	256.00
IUUC-Xtr-132151	Xenopus tropicalis	20.79	7.00e-08	50.40
IUUC-Yli-134391	Yarrowia lipolytica	30.52	1.00e-78	285.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence