iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005830

UUCD1 version

UUC-ArL-01262

Ensembl Protein ID

fgenesh2_kg.7__210__AT4G39910.1

UniProt Accession

D7M971; D7M971_ARALL

Genbank Protein ID

EFH45195.1

Protein Name

Ubiquitin-specific protease 3

Genbank Nucleotide ID

GL348719

Gene Name

ATUBP3; ARALYDRAFT_490777

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__210__AT4G39910.1	fgenesh2_kg.7__210__AT4G39910.1	fgenesh2_kg.7__210__AT4G39910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.00e-98	331.3	23	366

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellka 76
           +G++N+gNtCY+NSvLQ+L+++ ++re+lle +  + +     + +++l+++l++lf+++   k+k+++++p+++++ 
   Q: 23   FGFENFGNTCYCNSVLQALYFCVPFREQLLE-YYTSNKSV--ADAEENLMTCLADLFSQISsqKKKTGVIAPKRFVQR 97
           69*****************************.44443333..6899**************98899999********** PP
   S: 77   lkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsde..........aeekkkkknkslisd 144
           lkk +e f++y++qDa+Efl++ll+++ + l+ke++ +k+e e +++s+ + +          +   +k+   +++++
   Q: 98   LKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEAKATKTEHETSSSSSPE-KianglkvpqaNGVVHKEPIVTWVHN 174
           *******************************77555555555555544444.359999998888888888888***** PP
   S: 145  lFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLesftkeeelegenkyycekckkkqeaekklk 222
           +Fqg l+++++cl+c++v+ r+e+fldlsl++++++     s+++cL++f+++e+l+ e+k++c+kc+++qea+k++k
   Q: 175  IFQGILTNETRCLRCETVTARDETFLDLSLDIEQNS-----SITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMK 247
           ************************************.....9************************************ PP
   S: 223  lkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG.slssGHYvayv 299
           +kk P++L++hLkRf++ e+ ++ +k++ +v fpleL+ls+ ++        +++Y+L+avvvH G ++++GHYv++v
   Q: 248  IKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEP-Y----ADVEYSLFAVVVHVGsGPNHGHYVSLV 320
           ****************************************77766.3....279************************ PP
   S: 300  knekgkWllfdDskVtevkeeevleetg.........staYvlfYkr 337
           k+ +++Wl fdD++V+ ++e+ v+++ g         + +Y+lfY++
   Q: 321  KS-HNHWLFFDDENVEMIEESAVQTFFGssqeyssntDHGYILFYES 366
           **.889*******************999*****************85 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MGAAGSKLEK ALGDQFPEGE RYFGFENFGN TCYCNSVLQA LYFCVPFREQ LLEYYTSNKS 60
VADAEENLMT CLADLFSQIS SQKKKTGVIA PKRFVQRLKK QNELFRSYMH QDAHEFLNYL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCTTCTCTT CGGCTCCTTG GAAATCTGAA TTATCCGATC GAATCGAACC ATCGCAGAGG 60
CTAAAGAAGA GGATAATACT TCCTTTGAGT CAAATCGGAC GAGTCAGGAA CAGGAAAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

aly:ARALYDRAFT_490777

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000934	Aegilops tauschii	76.18	9.00e-174	602.00
IUUC-Aml-002353	Ailuropoda melanoleuca	58.27	9.00e-123	432.00
IUUC-Atr-002650	Amborella trichopoda	88.83	0.00e+00	662.00
IUUC-Apl-003380	Anas platyrhynchos	57.72	7.00e-121	426.00
IUUC-Aca-005031	Anolis carolinensis	58.27	2.00e-124	438.00
IUUC-Ath-007280	Arabidopsis thaliana	99.73	0.00e+00	731.00
IUUC-Ago-007871	Ashbya gossypii	34.82	7.00e-47	181.00
IUUC-Acl-008239	Aspergillus clavatus	44.69	9.00e-71	260.00
IUUC-Afl-008602	Aspergillus flavus	47.70	2.00e-72	266.00
IUUC-Afu-008816	Aspergillus fumigatus	47.92	4.00e-72	265.00
IUUC-Ani-009137	Aspergillus nidulans	46.08	4.00e-70	258.00
IUUC-Ang-009703	Aspergillus niger	47.56	8.00e-73	267.00
IUUC-Aor-009901	Aspergillus oryzae	47.70	1.00e-72	266.00
IUUC-Ate-010431	Aspergillus terreus	45.87	8.00e-70	258.00
IUUC-Ame-011015	Astyanax mexicanus	59.08	2.00e-125	441.00
IUUC-Bgr-012071	Blumeria graminis	44.03	9.00e-76	277.00
IUUC-Bta-013023	Bos taurus	58.15	3.00e-122	430.00
IUUC-Bci-013837	Botrytis cinerea	43.21	3.00e-75	275.00
IUUC-Bdi-014887	Brachypodium distachyon	83.97	0.00e+00	625.00
IUUC-Bol-015138	Brassica oleracea	95.96	0.00e+00	705.00
IUUC-Bra-016956	Brassica rapa	96.77	0.00e+00	731.00
IUUC-Cel-018379	Caenorhabditis elegans	49.63	9.00e-111	392.00
IUUC-Cja-018956	Callithrix jacchus	58.15	6.00e-122	429.00
IUUC-Cfa-020534	Canis familiaris	58.81	3.00e-123	434.00
IUUC-Cpo-022443	Cavia porcellus	58.15	5.00e-122	430.00
IUUC-Cre-022711	Chlamydomonas reinhardtii	62.37	1.00e-123	435.00
IUUC-Csa-023841	Chlorocebus sabaeus	58.27	7.00e-123	432.00
IUUC-Cho-024902	Choloepus hoffmanni	49.18	7.00e-94	336.00
IUUC-Cin-025659	Ciona intestinalis	47.87	1.00e-100	359.00
IUUC-Csv-025828	Ciona savignyi	49.80	9.00e-65	239.00
IUUC-Cgl-026611	Colletotrichum gloeosporioides	43.34	3.00e-76	279.00
IUUC-Cne-026900	Cryptococcus neoformans	39.51	2.00e-51	196.00
IUUC-Dre-027845	Danio rerio	59.08	2.00e-125	441.00
IUUC-Dno-029209	Dasypus novemcinctus	58.15	1.00e-121	429.00
IUUC-Dor-030972	Dipodomys ordii	56.60	4.00e-83	300.00
IUUC-Dse-031470	Dothistroma septosporum	47.62	3.00e-73	269.00
IUUC-Dme-032038	Drosophila melanogaster	58.74	1.00e-70	259.00
IUUC-Ete-033125	Echinops telfairi	48.71	3.00e-72	264.00
IUUC-Eca-033721	Equus caballus	58.15	4.00e-122	430.00
IUUC-Eeu-034916	Erinaceus europaeus	58.71	3.00e-99	354.00
IUUC-Fca-036299	Felis catus	58.15	6.00e-122	429.00
IUUC-Fal-036833	Ficedula albicollis	59.14	2.00e-122	431.00
IUUC-Fox-037682	Fusarium oxysporum	43.12	1.00e-74	273.00
IUUC-Fso-038299	Fusarium solani	38.33	5.00e-78	285.00
IUUC-Gmo-038763	Gadus morhua	58.27	1.00e-124	438.00
IUUC-Ggr-039806	Gaeumannomyces graminis	45.09	2.00e-78	286.00
IUUC-Gga-041157	Gallus gallus	57.99	2.00e-121	428.00
IUUC-Gac-041967	Gasterosteus aculeatus	59.08	7.00e-126	442.00
IUUC-Gma-043828	Glycine max	90.54	0.00e+00	682.00
IUUC-Ggo-044659	Gorilla gorilla	58.15	5.00e-122	429.00
IUUC-Hsa-046156	Homo sapiens	58.27	7.00e-123	432.00
IUUC-Hvu-047692	Hordeum vulgare	82.61	1.00e-177	615.00
IUUC-Itr-048157	Ictidomys tridecemlineatus	58.27	7.00e-123	432.00
IUUC-Kpa-049250	Komagataella pastoris	43.42	6.00e-67	248.00
IUUC-Lch-049969	Latimeria chalumnae	58.81	4.00e-121	426.00
IUUC-Lpe-051368	Leersia perrieri	82.34	2.00e-179	620.00
IUUC-Loc-052479	Lepisosteus oculatus	57.26	2.00e-122	431.00
IUUC-Lma-053300	Leptosphaeria maculans	42.94	4.00e-74	271.00
IUUC-Laf-054085	Loxodonta africana	58.27	7.00e-123	432.00
IUUC-Mcc-055566	Macaca mulatta	58.15	4.00e-122	430.00
IUUC-Mor-057072	Magnaporthe oryzae	43.96	5.00e-77	281.00
IUUC-Mpo-057424	Magnaporthe poae	45.26	1.00e-78	287.00
IUUC-Mtr-057715	Medicago truncatula	88.38	0.00e+00	672.00
IUUC-Mla-059142	Melampsora laricipopulina	51.94	3.00e-93	336.00
IUUC-Mga-059575	Meleagris gallopavo	57.88	2.00e-120	425.00
IUUC-Mvi-060357	Microbotryum violaceum	52.76	2.00e-76	280.00
IUUC-Mmr-060751	Microcebus murinus	58.81	2.00e-123	434.00
IUUC-Mdo-062579	Monodelphis domestica	58.27	2.00e-123	434.00
IUUC-Mmu-063611	Mus musculus	58.27	7.00e-123	432.00
IUUC-Mac-065323	Musa acuminata	83.97	0.00e+00	634.00
IUUC-Mpu-066038	Mustela putorius furo	58.15	1.00e-121	429.00
IUUC-Mlu-068183	Myotis lucifugus	58.15	4.00e-122	430.00
IUUC-Nfi-068611	Neosartorya fischeri	46.18	9.00e-72	264.00
IUUC-Ncr-068699	Neurospora crassa	43.03	2.00e-75	276.00
IUUC-Nle-069330	Nomascus leucogenys	58.27	7.00e-123	432.00
IUUC-Opr-070980	Ochotona princeps	58.15	5.00e-122	429.00
IUUC-Ont-072658	Oreochromis niloticus	59.08	8.00e-126	442.00
IUUC-Oan-073372	Ornithorhynchus anatinus	58.70	4.00e-122	430.00
IUUC-Ocu-074923	Oryctolagus cuniculus	57.88	7.00e-121	426.00
IUUC-Oba-075620	Oryza barthii	83.42	2.00e-179	620.00
IUUC-Obr-076208	Oryza brachyantha	83.42	2.00e-179	620.00
IUUC-Ogl-077763	Oryza glaberrima	83.42	2.00e-179	620.00
IUUC-Ogu-078571	Oryza glumaepatula	83.70	2.00e-180	623.00
IUUC-Oin-080002	Oryza indica	83.97	0.00e+00	632.00
IUUC-Olo-080882	Oryza longistaminata	82.34	2.00e-179	620.00
IUUC-Ome-081549	Oryza meridionalis	82.34	2.00e-179	620.00
IUUC-Oni-082982	Oryza nivara	82.34	2.00e-179	620.00
IUUC-Opu-084002	Oryza punctata	83.15	5.00e-179	619.00
IUUC-Oru-084226	Oryza rufipogon	83.97	0.00e+00	632.00
IUUC-Osa-085453	Oryza sativa	83.97	0.00e+00	632.00
IUUC-Ola-087418	Oryzias latipes	59.08	9.00e-126	442.00
IUUC-Olu-087809	Ostreococcus lucimarinus	49.32	5.00e-92	330.00
IUUC-Oga-088073	Otolemur garnettii	58.15	4.00e-122	430.00
IUUC-Oar-089248	Ovis aries	58.15	8.00e-122	429.00
IUUC-Ptr-090814	Pan troglodytes	58.27	7.00e-123	432.00
IUUC-Pan-091753	Papio anubis	58.27	7.00e-123	432.00
IUUC-Psi-094012	Pelodiscus sinensis	57.88	1.00e-120	425.00
IUUC-Pma-094388	Petromyzon marinus	58.40	9.00e-124	435.00
IUUC-Pno-095044	Phaeosphaeria nodorum	47.73	2.00e-73	270.00
IUUC-Ppa-095415	Physcomitrella patens	80.43	3.00e-180	623.00
IUUC-Pfo-097369	Poecilia formosa	59.19	4.00e-125	440.00
IUUC-Pab-098594	Pongo abelii	58.27	1.00e-122	432.00
IUUC-Pop-099016	Populus trichocarpa	89.73	0.00e+00	679.00
IUUC-Pca-100835	Procavia capensis	53.96	4.00e-99	353.00
IUUC-Ppe-101474	Prunus persica	90.00	0.00e+00	684.00
IUUC-Pva-102892	Pteropus vampyrus	58.15	7.00e-122	429.00
IUUC-Pgr-103306	Puccinia graminis	51.62	1.00e-91	331.00
IUUC-Pte-104356	Pyrenophora teres	48.18	2.00e-74	273.00
IUUC-Pyt-104709	Pyrenophora triticirepentis	48.18	4.00e-74	271.00
IUUC-Rno-104909	Rattus norvegicus	58.27	7.00e-123	432.00
IUUC-Sce-106367	Saccharomyces cerevisiae	38.61	2.00e-58	220.00
IUUC-Sha-107400	Sarcophilus harrisii	58.15	2.00e-122	431.00
IUUC-Sja-107684	Schizosaccharomyces japonicus	43.56	2.00e-61	229.00
IUUC-Spo-108095	Schizosaccharomyces pombe	45.34	2.00e-72	266.00
IUUC-Smo-109064	Selaginella moellendorffii	80.27	8.00e-168	582.00
IUUC-Sit-109700	Setaria italica	84.51	1.00e-180	624.00
IUUC-Sly-111210	Solanum lycopersicum	88.83	0.00e+00	664.00
IUUC-Stu-112398	Solanum tuberosum	85.71	0.00e+00	653.00
IUUC-Sar-113216	Sorex araneus	58.42	3.00e-120	424.00
IUUC-Sbi-114562	Sorghum bicolor	84.78	0.00e+00	636.00
IUUC-Sre-115197	Sporisorium reilianum	48.23	4.00e-75	276.00
IUUC-Ssc-115550	Sus scrofa	58.15	6.00e-122	429.00
IUUC-Tgu-116800	Taeniopygia guttata	57.99	2.00e-121	428.00
IUUC-Tru-118613	Takifugu rubripes	59.08	8.00e-126	442.00
IUUC-Tsy-119520	Tarsius syrichta	49.81	6.00e-67	246.00
IUUC-Tni-120293	Tetraodon nigroviridis	59.08	8.00e-126	442.00
IUUC-Tca-121329	Theobroma cacao	90.84	0.00e+00	687.00
IUUC-Tre-122226	Trichoderma reesei	43.75	6.00e-76	278.00
IUUC-Tvi-122330	Trichoderma virens	43.75	2.00e-76	279.00
IUUC-Tae-125756	Triticum aestivum	83.70	5.00e-180	622.00
IUUC-Tur-126331	Triticum urartu	83.70	3.00e-180	623.00
IUUC-Tme-126890	Tuber melanosporum	44.74	1.00e-85	310.00
IUUC-Tbe-127783	Tupaia belangeri	58.31	1.00e-119	422.00
IUUC-Ttr-129083	Tursiops truncatus	58.54	8.00e-123	432.00
IUUC-Uma-129409	Ustilago maydis	49.47	9.00e-76	278.00
IUUC-Vda-129736	Verticillium dahliae	38.34	6.00e-58	218.00
IUUC-Vpa-130590	Vicugna pacos	55.28	9.00e-112	395.00
IUUC-Vvi-131371	Vitis vinifera	91.03	0.00e+00	685.00
IUUC-Xtr-132082	Xenopus tropicalis	57.84	2.00e-121	427.00
IUUC-Xma-133475	Xiphophorus maculatus	58.81	2.00e-125	441.00
IUUC-Yli-134632	Yarrowia lipolytica	44.74	3.00e-74	272.00
IUUC-Zma-135887	Zea mays	83.97	3.00e-180	623.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence