iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116030

Ensembl Protein ID

ENSSSCP00000009803.2

UniProt Accession

F1RWW3; F1RWW3_PIG

Genbank Protein ID

ENSSSCP00000009803

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU951443

Gene Name

SMARCAD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000009193.2	ENSSSCT00000010066.2	ENSSSCP00000009803.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	44.84	2.00e-125	444.00	IUUC-Sce-106399

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

MNLFNLDRFR FEKRNKIEEA PEATPQPSRP GPSSPISLSA EEENAEGEVS RAGTPDSDVT 60
EKTAEDSSVP EMPENERKAG ISYFKNQRGI QYIDLSSDSE DIISPNCSST VQEKKFNKDT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGTGTTGCG TCATCACTAC GCGCTCATTG GGCTTCTCCC TGCTGCTTTA GAAGGTCCCA 60
GCCCGGCTAC CGTCGCTCCA CGCCAGGAAT TATTTTTTTC ATTTCAACCT TTGTTACCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003892--CUE
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR027417--P-loop_NTPase
IPR000330--SNF2_N

PROSITE

PS51140--CUE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER

Pfam

PF00271--Helicase_C
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc

Gene Ontology

GO:0000792--C:heterochromatin
GO:0043596--C:nuclear replication fork
GO:0005654--C:nucleoplasm
GO:0035861--C:site of double-strand break
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0051304--P:chromosome separation
GO:0000729--P:DNA double-strand break processing
GO:0070932--P:histone H3 deacetylation
GO:0070933--P:histone H4 deacetylation
GO:0000018--P:regulation of DNA recombination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000567	Aegilops tauschii	38.30	3.00e-100	359.00
IUUC-Aml-002063	Ailuropoda melanoleuca	95.92	0.00e+00	1901.00
IUUC-Atr-003078	Amborella trichopoda	35.75	7.00e-105	374.00
IUUC-Apl-003860	Anas platyrhynchos	70.46	0.00e+00	1339.00
IUUC-Aca-004485	Anolis carolinensis	68.44	0.00e+00	1363.00
IUUC-Aly-006561	Arabidopsis lyrata	38.97	6.00e-105	374.00
IUUC-Ath-006832	Arabidopsis thaliana	39.32	4.00e-106	379.00
IUUC-Ago-007758	Ashbya gossypii	45.68	7.00e-135	474.00
IUUC-Acl-008226	Aspergillus clavatus	44.90	4.00e-134	472.00
IUUC-Afl-008556	Aspergillus flavus	45.98	5.00e-132	465.00
IUUC-Afu-008799	Aspergillus fumigatus	44.53	7.00e-134	471.00
IUUC-Ani-009127	Aspergillus nidulans	45.57	7.00e-131	461.00
IUUC-Ang-009676	Aspergillus niger	44.38	6.00e-133	468.00
IUUC-Aor-010184	Aspergillus oryzae	45.27	5.00e-133	468.00
IUUC-Ate-010559	Aspergillus terreus	37.68	2.00e-131	463.00
IUUC-Ame-011933	Astyanax mexicanus	60.36	0.00e+00	889.00
IUUC-Bta-012963	Bos taurus	94.98	0.00e+00	1903.00
IUUC-Bci-013670	Botrytis cinerea	41.44	7.00e-119	421.00
IUUC-Bdi-014286	Brachypodium distachyon	37.66	1.00e-101	364.00
IUUC-Bol-016519	Brassica oleracea	39.40	3.00e-106	379.00
IUUC-Bra-017239	Brassica rapa	39.40	4.00e-106	379.00
IUUC-Cel-018253	Caenorhabditis elegans	43.47	5.00e-140	491.00
IUUC-Cja-019465	Callithrix jacchus	94.27	0.00e+00	1875.00
IUUC-Cfa-020637	Canis familiaris	94.60	0.00e+00	1924.00
IUUC-Cpo-021822	Cavia porcellus	92.03	0.00e+00	1724.00
IUUC-Csa-023315	Chlorocebus sabaeus	97.98	0.00e+00	1654.00
IUUC-Cin-025444	Ciona intestinalis	50.00	2.00e-175	609.00
IUUC-Cgl-026383	Colletotrichum gloeosporioides	40.04	1.00e-105	377.00
IUUC-Cne-027090	Cryptococcus neoformans	36.08	7.00e-114	404.00
IUUC-Dre-028385	Danio rerio	59.18	0.00e+00	872.00
IUUC-Dno-028932	Dasypus novemcinctus	94.07	0.00e+00	1902.00
IUUC-Dse-031394	Dothistroma septosporum	36.75	5.00e-104	372.00
IUUC-Dme-031640	Drosophila melanogaster	45.54	7.00e-157	547.00
IUUC-Eca-033276	Equus caballus	95.83	0.00e+00	1954.00
IUUC-Fca-035936	Felis catus	94.95	0.00e+00	1917.00
IUUC-Fal-037636	Ficedula albicollis	65.84	0.00e+00	1289.00
IUUC-Fso-038229	Fusarium solani	35.55	2.00e-111	396.00
IUUC-Gmo-039654	Gadus morhua	56.91	0.00e+00	894.00
IUUC-Ggr-039922	Gaeumannomyces graminis	33.29	2.00e-94	340.00
IUUC-Gga-040646	Gallus gallus	65.25	0.00e+00	1340.00
IUUC-Gac-042320	Gasterosteus aculeatus	66.20	0.00e+00	803.00
IUUC-Gma-042832	Glycine max	39.49	8.00e-107	380.00
IUUC-Ggo-044875	Gorilla gorilla	86.90	0.00e+00	1743.00
IUUC-Hsa-046992	Homo sapiens	94.37	0.00e+00	1884.00
IUUC-Hvu-047408	Hordeum vulgare	38.87	3.00e-102	366.00
IUUC-Itr-047881	Ictidomys tridecemlineatus	98.91	0.00e+00	1116.00
IUUC-Kpa-049212	Komagataella pastoris	43.03	9.00e-128	451.00
IUUC-Lpe-050987	Leersia perrieri	35.02	8.00e-101	361.00
IUUC-Loc-052272	Lepisosteus oculatus	53.14	0.00e+00	998.00
IUUC-Lma-053118	Leptosphaeria maculans	42.21	7.00e-122	431.00
IUUC-Laf-053436	Loxodonta africana	92.42	0.00e+00	1838.00
IUUC-Mcc-055209	Macaca mulatta	96.87	0.00e+00	1672.00
IUUC-Mor-056994	Magnaporthe oryzae	34.65	2.00e-95	343.00
IUUC-Mpo-057305	Magnaporthe poae	33.71	9.00e-99	355.00
IUUC-Mtr-058432	Medicago truncatula	39.78	2.00e-105	376.00
IUUC-Mla-058972	Melampsora laricipopulina	39.17	6.00e-124	437.00
IUUC-Mga-059572	Meleagris gallopavo	63.21	0.00e+00	1189.00
IUUC-Mvi-060209	Microbotryum violaceum	40.23	6.00e-141	495.00
IUUC-Mmr-061416	Microcebus murinus	92.79	0.00e+00	1127.00
IUUC-Mdo-062869	Monodelphis domestica	79.98	0.00e+00	1604.00
IUUC-Mmu-064272	Mus musculus	88.16	0.00e+00	1627.00
IUUC-Mac-064963	Musa acuminata	37.19	1.00e-94	340.00
IUUC-Mpu-065755	Mustela putorius furo	95.92	0.00e+00	1941.00
IUUC-Mlu-067604	Myotis lucifugus	91.46	0.00e+00	1828.00
IUUC-Nfi-068310	Neosartorya fischeri	44.34	4.00e-133	469.00
IUUC-Ncr-068841	Neurospora crassa	34.03	1.00e-109	391.00
IUUC-Nle-069227	Nomascus leucogenys	94.47	0.00e+00	1887.00
IUUC-Opr-071088	Ochotona princeps	86.89	0.00e+00	1348.00
IUUC-Ont-072291	Oreochromis niloticus	66.15	0.00e+00	826.00
IUUC-Oan-073460	Ornithorhynchus anatinus	85.14	0.00e+00	1376.00
IUUC-Ocu-074811	Oryctolagus cuniculus	93.20	0.00e+00	1831.00
IUUC-Oba-075463	Oryza barthii	38.08	2.00e-100	359.00
IUUC-Obr-076342	Oryza brachyantha	38.08	4.00e-103	369.00
IUUC-Ogu-078837	Oryza glumaepatula	38.08	7.00e-101	361.00
IUUC-Oin-079623	Oryza indica	38.08	4.00e-101	362.00
IUUC-Ome-081105	Oryza meridionalis	38.08	3.00e-101	362.00
IUUC-Oni-082598	Oryza nivara	38.08	5.00e-101	362.00
IUUC-Opu-084040	Oryza punctata	38.08	6.00e-101	361.00
IUUC-Oru-084219	Oryza rufipogon	38.08	3.00e-101	362.00
IUUC-Osa-085461	Oryza sativa	38.08	4.00e-101	362.00
IUUC-Ola-087307	Oryzias latipes	66.46	0.00e+00	795.00
IUUC-Olu-087812	Ostreococcus lucimarinus	39.46	5.00e-101	361.00
IUUC-Oga-089064	Otolemur garnettii	92.92	0.00e+00	1854.00
IUUC-Oar-090054	Ovis aries	95.72	0.00e+00	1902.00
IUUC-Ptr-091228	Pan troglodytes	94.66	0.00e+00	1891.00
IUUC-Pan-092769	Papio anubis	94.06	0.00e+00	1754.00
IUUC-Psi-093202	Pelodiscus sinensis	70.87	0.00e+00	1361.00
IUUC-Pma-094725	Petromyzon marinus	46.11	0.00e+00	857.00
IUUC-Pno-095130	Phaeosphaeria nodorum	41.55	2.00e-110	394.00
IUUC-Ppa-095559	Physcomitrella patens	39.79	2.00e-110	393.00
IUUC-Pfo-096546	Poecilia formosa	66.61	0.00e+00	836.00
IUUC-Pab-097698	Pongo abelii	93.99	0.00e+00	1875.00
IUUC-Pop-099986	Populus trichocarpa	39.36	4.00e-106	379.00
IUUC-Ppe-101649	Prunus persica	39.23	8.00e-104	370.00
IUUC-Pva-102138	Pteropus vampyrus	93.11	0.00e+00	1849.00
IUUC-Pgr-103272	Puccinia graminis	35.66	1.00e-121	431.00
IUUC-Ptt-103880	Puccinia triticina	35.96	2.00e-129	456.00
IUUC-Pte-104260	Pyrenophora teres	42.64	1.00e-117	417.00
IUUC-Pyt-104532	Pyrenophora triticirepentis	33.59	3.00e-79	290.00
IUUC-Rno-105903	Rattus norvegicus	90.19	0.00e+00	1685.00
IUUC-Sce-106399	Saccharomyces cerevisiae	44.84	3.00e-127	449.00
IUUC-Sha-106783	Sarcophilus harrisii	79.52	0.00e+00	1557.00
IUUC-Sja-107887	Schizosaccharomyces japonicus	41.16	6.00e-143	501.00
IUUC-Spo-108154	Schizosaccharomyces pombe	42.46	2.00e-148	520.00
IUUC-Smo-108759	Selaginella moellendorffii	40.15	1.00e-105	376.00
IUUC-Sit-110023	Setaria italica	37.52	5.00e-101	362.00
IUUC-Sly-111423	Solanum lycopersicum	39.28	3.00e-106	379.00
IUUC-Sbi-114688	Sorghum bicolor	37.23	1.00e-102	367.00
IUUC-Sre-114983	Sporisorium reilianum	35.61	1.00e-110	394.00
IUUC-Tgu-117451	Taeniopygia guttata	77.93	0.00e+00	1199.00
IUUC-Tru-118600	Takifugu rubripes	66.46	0.00e+00	797.00
IUUC-Tsy-119130	Tarsius syrichta	84.01	0.00e+00	1552.00
IUUC-Tni-119758	Tetraodon nigroviridis	57.04	0.00e+00	882.00
IUUC-Tca-121797	Theobroma cacao	39.63	2.00e-106	379.00
IUUC-Tre-121883	Trichoderma reesei	40.56	3.00e-103	369.00
IUUC-Tvi-122333	Trichoderma virens	40.33	5.00e-111	395.00
IUUC-Tae-122848	Triticum aestivum	38.30	3.00e-100	359.00
IUUC-Tur-126594	Triticum urartu	38.30	5.00e-100	358.00
IUUC-Tme-127106	Tuber melanosporum	41.97	6.00e-123	435.00
IUUC-Tbe-127911	Tupaia belangeri	97.22	0.00e+00	995.00
IUUC-Ttr-128597	Tursiops truncatus	94.85	0.00e+00	1844.00
IUUC-Uma-129321	Ustilago maydis	35.43	3.00e-111	396.00
IUUC-Vpa-130686	Vicugna pacos	87.97	0.00e+00	1679.00
IUUC-Vvi-131046	Vitis vinifera	39.01	4.00e-106	378.00
IUUC-Xtr-132740	Xenopus tropicalis	65.38	0.00e+00	1126.00
IUUC-Xma-134260	Xiphophorus maculatus	66.30	0.00e+00	829.00
IUUC-Yli-134634	Yarrowia lipolytica	40.54	1.00e-138	487.00
IUUC-Zma-135493	Zea mays	35.13	1.00e-101	363.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence