iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058390

Ensembl Protein ID

KEH31077

UniProt Accession

A0A072UN05; A0A072UN05_MEDTR

Genbank Protein ID

KEH31077.1

Protein Name

E3 ubiquitin-protein ligase RMA1H1-like protein

Genbank Nucleotide ID

CM001220

Gene Name

MTR_4g088870

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_4g088870	KEH31077	KEH31077

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.50e-06	28.9	30	92
E3 activity/RING/RING	5.90e-07	31.3	34	81

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk........tcPvtrqplteedlvPn 58
             f C I l+  ++Pvv+ +G+ +  s+I kwl  ++         +cPv+++ ++++++vP 
   Q: 30   NCFDCHICLDFAHEPVVTLCGHLFCWSCIYKWLFVQRAslapdehpQCPVCKHDISHTKMVPL 92
           679******************************8888788888999**************996 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...pglknssskefrCPlCr 46
           C iCl+   + p+v+ CgH+f+ +C++kw   +  +     + +CP+C+
   Q: 34   CHICLDFAHE-PVVTLCGHLFCWSCIYKWlfvQRASLAPDEHPQCPVCK 81
           99**998877.999***************996444444566679****7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDFEHEEFFN QEWKADGNSV TETEKENIDN CFDCHICLDF AHEPVVTLCG HLFCWSCIYK 60
WLFVQRASLA PDEHPQCPVC KHDISHTKMV PLYGRGQTLS SRRGRNRKAT LEDISIPPRP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCACTAGT ATCATCATCA TTACACAAAT CCCCAACTTA TCCACTGGGT ATGTTTCTCA 60
AACTCAAACC TTGTGGTTTT TCTTCTTCTT TTTCTTGCAT GTGCTTTTTT AAGCATTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_4g088870

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Kpa-049242	Komagataella pastoris	36.51	7.00e-09	53.10
IUUC-Pno-094942	Phaeosphaeria nodorum	32.67	6.00e-10	57.40
IUUC-Pte-104163	Pyrenophora teres	35.96	1.00e-10	59.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence