iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108035

Ensembl Protein ID

SPCC330.02.1:pep

UniProt Accession

O74999; RAD7_SCHPO

Genbank Protein ID

CAA21066.1

Protein Name

DNA repair protein rhp7; RAD7 homolog

Genbank Nucleotide ID

CU329672

Gene Name

rhp7; SPCC330.02; SPCC613.14

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPCC330.02	SPCC330.02.1	SPCC330.02.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	28.69	2.00e-45	178.00	IUUC-Sce-106393

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Schizosaccharomyces pombe

Functional Description
(View)

Involved in global genome repair (GGR) via nucleotide excision repair (NER), in conjunction with rhp16, after UV irradiation.

Protein Sequence
(Fasta)

MSSGSRVRGP NSALTEFLRS QGINASALGR ARPPRQSEES AGQSTGTESE VIQTPTSVEE 60
NNEDENSMST TTIEIPVVKR RNLRNQKKKK KTDEEAEDNE DTFSMNSRAG FSYKAREHTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCATTTTGT AATTGGTCCA CTTTTAGAGT AGATATATGC ATAGTAGTGG TTGGTATGAG 60
ACAAGTTGCC ACGCGATCTG AAGCGATTTA ATTAAACTCA ACCACACTTC CACCTTATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0234--DNA repair
KW-0539--Nucleus
KW-1185--Reference proteome

Interpro

IPR032675--L_dom-like
IPR006553--Leu-rich_rpt_Cys-con_subtyp

SMART

SM00367--LRR_CC

Gene Ontology

GO:0044732--C:mitotic spindle pole body
GO:0000109--C:nucleotide-excision repair complex
GO:0005634--C:nucleus
GO:0006289--P:nucleotide-excision repair

KEGG

spo:SPCC330.02

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005409	Arabidopsis lyrata	25.78	1.00e-15	76.60
IUUC-Ath-006790	Arabidopsis thaliana	23.64	1.00e-08	53.10
IUUC-Ago-007886	Ashbya gossypii	28.39	9.00e-38	149.00
IUUC-Acl-008232	Aspergillus clavatus	24.54	7.00e-33	133.00
IUUC-Afl-008657	Aspergillus flavus	26.92	1.00e-36	145.00
IUUC-Afu-008978	Aspergillus fumigatus	25.45	2.00e-36	145.00
IUUC-Ani-009459	Aspergillus nidulans	24.60	4.00e-35	140.00
IUUC-Ang-009710	Aspergillus niger	23.57	1.00e-33	135.00
IUUC-Aor-010179	Aspergillus oryzae	27.56	4.00e-47	181.00
IUUC-Ate-010272	Aspergillus terreus	27.12	1.00e-41	162.00
IUUC-Bgr-012161	Blumeria graminis	26.83	4.00e-34	137.00
IUUC-Bdi-014296	Brachypodium distachyon	24.42	3.00e-13	68.20
IUUC-Cgl-026742	Colletotrichum gloeosporioides	27.56	2.00e-34	138.00
IUUC-Cne-027091	Cryptococcus neoformans	33.41	4.00e-62	230.00
IUUC-Cme-027303	Cyanidioschyzon merolae	23.81	1.00e-13	69.30
IUUC-Dse-031473	Dothistroma septosporum	25.37	4.00e-29	120.00
IUUC-Fox-038004	Fusarium oxysporum	24.55	2.00e-34	138.00
IUUC-Fso-038303	Fusarium solani	24.09	1.00e-34	139.00
IUUC-Kpa-049374	Komagataella pastoris	32.57	1.00e-62	231.00
IUUC-Lma-053024	Leptosphaeria maculans	24.91	5.00e-39	153.00
IUUC-Mor-057127	Magnaporthe oryzae	24.22	4.00e-38	150.00
IUUC-Mpo-057313	Magnaporthe poae	25.91	5.00e-43	167.00
IUUC-Mla-059064	Melampsora laricipopulina	31.24	7.00e-65	239.00
IUUC-Mvi-060420	Microbotryum violaceum	33.33	2.00e-53	201.00
IUUC-Nfi-068453	Neosartorya fischeri	25.13	2.00e-40	158.00
IUUC-Ncr-068686	Neurospora crassa	27.43	1.00e-42	166.00
IUUC-Oba-075119	Oryza barthii	27.53	6.00e-12	63.90
IUUC-Ogl-077393	Oryza glaberrima	27.34	7.00e-12	63.50
IUUC-Ogu-078431	Oryza glumaepatula	28.03	7.00e-13	67.40
IUUC-Oin-079837	Oryza indica	28.37	6.00e-13	67.40
IUUC-Olo-080891	Oryza longistaminata	27.78	5.00e-12	63.90
IUUC-Ome-082008	Oryza meridionalis	27.01	1.00e-10	59.70
IUUC-Oru-084309	Oryza rufipogon	28.37	8.00e-13	67.00
IUUC-Olu-087656	Ostreococcus lucimarinus	36.51	4.00e-04	37.00
IUUC-Pno-094844	Phaeosphaeria nodorum	26.10	6.00e-37	146.00
IUUC-Pop-098975	Populus trichocarpa	26.20	2.00e-13	68.60
IUUC-Pgr-103407	Puccinia graminis	30.20	2.00e-63	234.00
IUUC-Ptt-103850	Puccinia triticina	27.32	5.00e-54	203.00
IUUC-Pte-104239	Pyrenophora teres	24.60	3.00e-39	154.00
IUUC-Pyt-104683	Pyrenophora triticirepentis	26.46	1.00e-37	149.00
IUUC-Sce-106393	Saccharomyces cerevisiae	27.99	2.00e-35	141.00
IUUC-Sja-107658	Schizosaccharomyces japonicus	57.07	1.00e-171	593.00
IUUC-Ssl-108573	Sclerotinia sclerotiorum	25.70	1.00e-36	145.00
IUUC-Sly-110955	Solanum lycopersicum	25.07	9.00e-13	67.40
IUUC-Sre-114934	Sporisorium reilianum	34.90	7.00e-73	266.00
IUUC-Tvi-122503	Trichoderma virens	25.00	7.00e-37	146.00
IUUC-Uma-129596	Ustilago maydis	34.42	6.00e-67	246.00
IUUC-Vda-130016	Verticillium dahliae	26.39	1.00e-34	139.00
IUUC-Vpa-130059	Vicugna pacos	29.55	3.00e-10	58.20
IUUC-Yli-134667	Yarrowia lipolytica	33.03	9.00e-74	269.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence