iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129923

Ensembl Protein ID

EGY15522

UniProt Accession

G2X954; G2X954_VERDV

Genbank Protein ID

EGY15522.1

Protein Name

WD repeat-containing protein 5B

Genbank Nucleotide ID

DS572708

Gene Name

VDAG_06686

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_06686	EGY15522	EGY15522

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-40	132.5	103	133
UBD/Beta-Prp	8.10e-58	195.0	9	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gHt++v +++f  +++ +vsGs+D tik+W+
   Q: 103  GHTNDVLSVSFsaDNRQIVSGSRDRTIKLWN 133
           8***********64499*************9 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
            tl+gh+  v +  + +++ ++l++gsrd+t+++w++t+         rsl gh+  v+++ +s+dg + +++s D+t+++w+lstg++++ + gh+++vl
   Q: 9    GTLEGHNGWVTSLATSIENPNMLLSGSRDKTLIIWNLTRDESqygypKRSLHGHSHIVSDCVISSDGAYALSASWDKTLRLWELSTGTTTRRFVGHTNDVL 109
           5788898888887777**********************988899********************************************************* PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktg 169
           s+sfs+++  +vsGs+drti++w++  + ++   ++gh+++v+cv+++p+    ++vs++ D+ v++W l+t 
   Q: 110  SVSFSADNRQIVSGSRDRTIKLWNTLGDCKFTISDKGHTEWVSCVRFSPNPqnPVIVSSGWDKLVKVWELNTC 182
           **************************9999999*************976543389*************99764 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MAEQLVLKGT LEGHNGWVTS LATSIENPNM LLSGSRDKTL IIWNLTRDES QYGYPKRSLH 60
GHSHIVSDCV ISSDGAYALS ASWDKTLRLW ELSTGTTTRR FVGHTNDVLS VSFSADNRQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGACTCCGA CCTCTCGAAC CTGCAACACC GCGACAATCG TCTCTTCCCT TCTCATCTAT 60
CTATCTGTGT CGGTAATCGC GCATTGAGAA TGGCTGAGCA GCTGGTTCTG AAGGGTACCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

vda:VDAG_06686

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000395	Aegilops tauschii	59.31	5.00e-96	342.00
IUUC-Aml-001935	Ailuropoda melanoleuca	72.44	1.00e-139	486.00
IUUC-Atr-002694	Amborella trichopoda	62.94	4.00e-116	408.00
IUUC-Apl-003918	Anas platyrhynchos	73.91	1.00e-124	437.00
IUUC-Aca-004869	Anolis carolinensis	72.44	1.00e-139	486.00
IUUC-Aly-005806	Arabidopsis lyrata	62.35	3.00e-118	416.00
IUUC-Ath-007584	Arabidopsis thaliana	62.04	9.00e-118	414.00
IUUC-Ago-007720	Ashbya gossypii	61.27	1.00e-114	404.00
IUUC-Acl-008156	Aspergillus clavatus	89.87	4.00e-173	598.00
IUUC-Afl-008684	Aspergillus flavus	91.77	1.00e-175	606.00
IUUC-Afu-008867	Aspergillus fumigatus	90.82	1.00e-174	603.00
IUUC-Ani-009221	Aspergillus nidulans	91.77	6.00e-176	607.00
IUUC-Ang-009843	Aspergillus niger	91.14	2.00e-174	602.00
IUUC-Aor-010193	Aspergillus oryzae	91.77	1.00e-175	606.00
IUUC-Ate-010420	Aspergillus terreus	90.94	4.00e-158	548.00
IUUC-Ame-010884	Astyanax mexicanus	72.12	2.00e-139	486.00
IUUC-Bgr-012064	Blumeria graminis	89.56	1.00e-172	596.00
IUUC-Bta-013357	Bos taurus	72.44	1.00e-139	486.00
IUUC-Bci-013862	Botrytis cinerea	93.67	1.00e-180	623.00
IUUC-Bdi-014690	Brachypodium distachyon	58.28	6.00e-106	375.00
IUUC-Bol-016005	Brassica oleracea	61.85	4.00e-118	416.00
IUUC-Bra-016871	Brassica rapa	62.35	1.00e-118	417.00
IUUC-Cel-018335	Caenorhabditis elegans	64.91	3.00e-114	402.00
IUUC-Cja-019914	Callithrix jacchus	72.44	1.00e-139	486.00
IUUC-Cfa-020755	Canis familiaris	72.44	1.00e-139	486.00
IUUC-Cpo-022377	Cavia porcellus	72.44	1.00e-139	487.00
IUUC-Cre-022909	Chlamydomonas reinhardtii	67.83	3.00e-128	449.00
IUUC-Csa-023025	Chlorocebus sabaeus	72.44	3.00e-139	486.00
IUUC-Cin-025647	Ciona intestinalis	67.52	5.00e-129	451.00
IUUC-Csv-026027	Ciona savignyi	67.52	1.00e-127	447.00
IUUC-Cgl-026718	Colletotrichum gloeosporioides	96.86	9.00e-168	580.00
IUUC-Cne-026930	Cryptococcus neoformans	72.29	9.00e-142	494.00
IUUC-Cme-027251	Cyanidioschyzon merolae	59.42	3.00e-115	406.00
IUUC-Dre-028669	Danio rerio	72.12	1.00e-138	483.00
IUUC-Dno-029470	Dasypus novemcinctus	63.78	2.00e-111	393.00
IUUC-Dor-031098	Dipodomys ordii	64.54	2.00e-106	376.00
IUUC-Dse-031255	Dothistroma septosporum	90.82	2.00e-175	605.00
IUUC-Dme-032118	Drosophila melanogaster	66.77	3.00e-128	449.00
IUUC-Ete-033182	Echinops telfairi	64.68	2.00e-81	293.00
IUUC-Eca-033296	Equus caballus	73.33	8.00e-65	237.00
IUUC-Eeu-034771	Erinaceus europaeus	67.95	1.00e-128	450.00
IUUC-Fca-036315	Felis catus	72.44	1.00e-139	486.00
IUUC-Fal-036990	Ficedula albicollis	70.22	1.00e-73	267.00
IUUC-Fox-037702	Fusarium oxysporum	95.25	0.00e+00	633.00
IUUC-Fso-038384	Fusarium solani	96.20	0.00e+00	635.00
IUUC-Gmo-039630	Gadus morhua	71.10	5.00e-136	475.00
IUUC-Ggr-039985	Gaeumannomyces graminis	94.62	0.00e+00	630.00
IUUC-Gga-040540	Gallus gallus	72.44	1.00e-139	486.00
IUUC-Gac-041316	Gasterosteus aculeatus	69.68	1.00e-134	470.00
IUUC-Gma-042872	Glycine max	60.87	6.00e-115	405.00
IUUC-Ggo-045253	Gorilla gorilla	72.44	1.00e-139	486.00
IUUC-Hsa-046809	Homo sapiens	72.44	1.00e-139	486.00
IUUC-Hvu-047683	Hordeum vulgare	58.54	1.00e-107	380.00
IUUC-Itr-048025	Ictidomys tridecemlineatus	72.44	1.00e-139	486.00
IUUC-Kpa-049214	Komagataella pastoris	60.90	5.00e-110	388.00
IUUC-Lch-049634	Latimeria chalumnae	70.51	1.00e-136	477.00
IUUC-Lpe-050763	Leersia perrieri	58.90	2.00e-107	380.00
IUUC-Loc-052163	Lepisosteus oculatus	72.44	1.00e-139	487.00
IUUC-Lma-053113	Leptosphaeria maculans	92.41	8.00e-178	613.00
IUUC-Laf-054422	Loxodonta africana	72.44	1.00e-139	486.00
IUUC-Mcc-055348	Macaca mulatta	72.44	3.00e-139	486.00
IUUC-Meu-056543	Macropus eugenii	72.44	1.00e-139	487.00
IUUC-Mor-057107	Magnaporthe oryzae	94.30	0.00e+00	627.00
IUUC-Mpo-057487	Magnaporthe poae	94.94	0.00e+00	632.00
IUUC-Mtr-058808	Medicago truncatula	61.18	3.00e-116	409.00
IUUC-Mla-058909	Melampsora laricipopulina	73.65	1.00e-143	500.00
IUUC-Mga-059387	Meleagris gallopavo	72.44	1.00e-139	486.00
IUUC-Mvi-060392	Microbotryum violaceum	74.20	5.00e-144	501.00
IUUC-Mmr-061141	Microcebus murinus	64.91	2.00e-103	366.00
IUUC-Mdo-062932	Monodelphis domestica	72.44	1.00e-139	486.00
IUUC-Mmu-064132	Mus musculus	72.44	1.00e-139	486.00
IUUC-Mac-064447	Musa acuminata	58.33	1.00e-101	360.00
IUUC-Mpu-066721	Mustela putorius furo	71.79	1.00e-136	476.00
IUUC-Mlu-068221	Myotis lucifugus	71.79	6.00e-129	451.00
IUUC-Nfi-068344	Neosartorya fischeri	91.14	2.00e-175	605.00
IUUC-Ncr-068722	Neurospora crassa	94.30	0.00e+00	627.00
IUUC-Nle-069865	Nomascus leucogenys	72.44	2.00e-139	486.00
IUUC-Opr-071100	Ochotona princeps	60.58	3.00e-107	379.00
IUUC-Ont-072287	Oreochromis niloticus	72.12	3.00e-139	485.00
IUUC-Oan-072788	Ornithorhynchus anatinus	72.44	1.00e-139	486.00
IUUC-Ocu-073844	Oryctolagus cuniculus	70.19	4.00e-133	465.00
IUUC-Oba-075981	Oryza barthii	56.70	3.00e-97	346.00
IUUC-Obr-076099	Oryza brachyantha	58.59	5.00e-107	379.00
IUUC-Ogl-077804	Oryza glaberrima	59.51	4.00e-109	385.00
IUUC-Ogu-078035	Oryza glumaepatula	59.88	5.00e-108	382.00
IUUC-Oin-079327	Oryza indica	59.88	5.00e-108	382.00
IUUC-Olo-081084	Oryza longistaminata	59.88	5.00e-108	382.00
IUUC-Ome-081366	Oryza meridionalis	59.20	8.00e-109	384.00
IUUC-Oni-082682	Oryza nivara	59.20	8.00e-109	384.00
IUUC-Opu-084010	Oryza punctata	58.90	1.00e-108	384.00
IUUC-Oru-084358	Oryza rufipogon	59.20	8.00e-109	384.00
IUUC-Osa-085296	Oryza sativa	59.20	8.00e-109	384.00
IUUC-Ola-086400	Oryzias latipes	71.79	1.00e-138	484.00
IUUC-Olu-087817	Ostreococcus lucimarinus	71.43	1.00e-136	477.00
IUUC-Oga-088811	Otolemur garnettii	72.44	1.00e-139	486.00
IUUC-Oar-089962	Ovis aries	72.44	1.00e-139	486.00
IUUC-Ptr-091340	Pan troglodytes	72.44	1.00e-139	486.00
IUUC-Pan-091946	Papio anubis	72.44	3.00e-139	486.00
IUUC-Pma-094535	Petromyzon marinus	74.04	1.00e-141	493.00
IUUC-Pno-095100	Phaeosphaeria nodorum	93.40	1.00e-118	416.00
IUUC-Ppa-095752	Physcomitrella patens	69.65	2.00e-132	462.00
IUUC-Pfo-097311	Poecilia formosa	71.47	9.00e-139	484.00
IUUC-Pab-097863	Pongo abelii	72.44	2.00e-139	486.00
IUUC-Pop-099345	Populus trichocarpa	61.18	5.00e-116	408.00
IUUC-Pca-100594	Procavia capensis	71.47	2.00e-137	480.00
IUUC-Ppe-101743	Prunus persica	61.11	2.00e-116	410.00
IUUC-Pva-102746	Pteropus vampyrus	58.97	3.00e-105	372.00
IUUC-Pgr-103375	Puccinia graminis	57.14	2.00e-99	353.00
IUUC-Ptt-103839	Puccinia triticina	74.52	3.00e-143	498.00
IUUC-Pte-104026	Pyrenophora teres	92.41	8.00e-178	613.00
IUUC-Pyt-104584	Pyrenophora triticirepentis	92.41	6.00e-178	614.00
IUUC-Rno-104964	Rattus norvegicus	72.44	1.00e-139	486.00
IUUC-Sce-106224	Saccharomyces cerevisiae	59.81	9.00e-110	387.00
IUUC-Sha-107409	Sarcophilus harrisii	72.44	1.00e-139	486.00
IUUC-Sja-107971	Schizosaccharomyces japonicus	71.15	4.00e-136	475.00
IUUC-Spo-108297	Schizosaccharomyces pombe	70.19	4.00e-134	468.00
IUUC-Ssl-108479	Sclerotinia sclerotiorum	93.67	1.00e-180	623.00
IUUC-Smo-109017	Selaginella moellendorffii	63.69	4.00e-116	409.00
IUUC-Sit-110060	Setaria italica	58.95	3.00e-108	383.00
IUUC-Sly-111496	Solanum lycopersicum	60.94	3.00e-117	412.00
IUUC-Stu-112757	Solanum tuberosum	60.94	4.00e-113	399.00
IUUC-Sar-113173	Sorex araneus	72.44	1.00e-139	486.00
IUUC-Sbi-114681	Sorghum bicolor	59.69	2.00e-108	383.00
IUUC-Sre-115107	Sporisorium reilianum	77.00	6.00e-151	524.00
IUUC-Ssc-116218	Sus scrofa	71.15	3.00e-136	475.00
IUUC-Tgu-117340	Taeniopygia guttata	33.44	1.00e-35	142.00
IUUC-Tru-118202	Takifugu rubripes	70.51	5.00e-136	475.00
IUUC-Tni-120260	Tetraodon nigroviridis	70.19	2.00e-135	473.00
IUUC-Tca-120951	Theobroma cacao	61.49	2.00e-117	413.00
IUUC-Tre-121961	Trichoderma reesei	96.52	0.00e+00	638.00
IUUC-Tvi-122447	Trichoderma virens	96.52	0.00e+00	638.00
IUUC-Tae-123560	Triticum aestivum	58.54	5.00e-108	382.00
IUUC-Tur-126335	Triticum urartu	62.31	6.00e-95	338.00
IUUC-Tme-127105	Tuber melanosporum	86.58	1.00e-161	559.00
IUUC-Tbe-128021	Tupaia belangeri	56.85	1.00e-58	216.00
IUUC-Ttr-128637	Tursiops truncatus	62.82	2.00e-115	407.00
IUUC-Uma-129634	Ustilago maydis	77.64	3.00e-151	525.00
IUUC-Vpa-130410	Vicugna pacos	58.30	7.00e-85	305.00
IUUC-Vvi-131115	Vitis vinifera	61.11	1.00e-117	414.00
IUUC-Xtr-132105	Xenopus tropicalis	72.44	3.00e-139	486.00
IUUC-Xma-133875	Xiphophorus maculatus	71.47	4.00e-138	482.00
IUUC-Yli-134624	Yarrowia lipolytica	67.19	2.00e-130	456.00
IUUC-Zma-134711	Zea mays	58.95	9.00e-107	377.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence