iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049429

Ensembl Protein ID

ENSLACP00000011805.1

UniProt Accession

H3AQ84; H3AQ84_LATCH

Genbank Protein ID

ENSLACP00000011805

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01115508

Gene Name

RNF40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000010392.1	ENSLACT00000011895.1	ENSLACP00000011805.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	29.71	2.00e-29	128.00	IUUC-Ath-007462
E3 activity/RING/RING	36.50	2.00e-40	164.00	IUUC-Cel-018659
E3 activity/RING/RING	57.03	8.00e-107	385.00	IUUC-Dme-032034
E3 activity/RING/RING	25.37	1.00e-16	83.60	IUUC-Sce-106384
E3 activity/RING/RING	43.08	6.00e-14	74.30	IUUC-Spo-108304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

KSDLSEPALS FLATLASSSA EEIELQLQER MAFSKKAVSC IVEVFSKLHK KIEDLCKKIH 60
NAGFECLDSA AKSLNKELMG ENRCLQDLVT QLQEKHHKIS LEVGLHRHGN SATSLPETWV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAGTGACC TAAGTGAGCC AGCCCTCTCG TTCCTGGCCA CGCTGGCGAG CAGCAGCGCC 60
GAAGAGATCG AGCTGCAGCT GCAGGAGAGG ATGGCCTTCT CCAAGAAGGC GGTGTCCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001027	Aegilops tauschii	27.74	3.00e-09	57.00
IUUC-Aml-002295	Ailuropoda melanoleuca	84.70	1.00e-167	583.00
IUUC-Aca-004850	Anolis carolinensis	90.68	3.00e-170	592.00
IUUC-Aly-006055	Arabidopsis lyrata	28.39	1.00e-29	125.00
IUUC-Ath-007462	Arabidopsis thaliana	28.65	9.00e-30	125.00
IUUC-Ame-011745	Astyanax mexicanus	86.72	2.00e-161	563.00
IUUC-Bgr-012245	Blumeria graminis	27.56	3.00e-11	63.90
IUUC-Bta-013173	Bos taurus	85.01	8.00e-166	577.00
IUUC-Bci-013926	Botrytis cinerea	28.84	7.00e-09	55.80
IUUC-Bdi-014799	Brachypodium distachyon	27.55	4.00e-31	130.00
IUUC-Bol-015858	Brassica oleracea	29.97	6.00e-34	139.00
IUUC-Bra-016804	Brassica rapa	30.50	2.00e-35	144.00
IUUC-Cel-018659	Caenorhabditis elegans	36.50	9.00e-42	165.00
IUUC-Cja-019042	Callithrix jacchus	84.57	2.00e-163	569.00
IUUC-Cfa-020318	Canis familiaris	65.13	0.00e+00	936.00
IUUC-Cpo-021539	Cavia porcellus	85.29	1.00e-162	567.00
IUUC-Cre-022940	Chlamydomonas reinhardtii	37.50	2.00e-08	54.30
IUUC-Csa-024051	Chlorocebus sabaeus	84.99	2.00e-167	582.00
IUUC-Cin-025174	Ciona intestinalis	63.77	2.00e-110	394.00
IUUC-Csv-025830	Ciona savignyi	56.16	2.00e-100	360.00
IUUC-Cne-026878	Cryptococcus neoformans	25.93	4.00e-14	73.60
IUUC-Dre-028171	Danio rerio	87.01	3.00e-162	565.00
IUUC-Dno-028892	Dasypus novemcinctus	84.70	1.00e-167	583.00
IUUC-Dor-030268	Dipodomys ordii	85.30	2.00e-165	576.00
IUUC-Dme-032034	Drosophila melanogaster	51.15	9.00e-164	570.00
IUUC-Eca-033436	Equus caballus	68.04	0.00e+00	957.00
IUUC-Eeu-035291	Erinaceus europaeus	73.95	4.00e-127	449.00
IUUC-Gmo-039269	Gadus morhua	84.21	3.00e-152	532.00
IUUC-Gac-041303	Gasterosteus aculeatus	84.44	2.00e-155	543.00
IUUC-Gma-042797	Glycine max	28.38	8.00e-37	149.00
IUUC-Ggo-045426	Gorilla gorilla	84.75	2.00e-167	582.00
IUUC-Hsa-045732	Homo sapiens	84.75	2.00e-167	583.00
IUUC-Hvu-047689	Hordeum vulgare	26.72	2.00e-28	120.00
IUUC-Itr-048724	Ictidomys tridecemlineatus	84.70	3.00e-167	582.00
IUUC-Lpe-051253	Leersia perrieri	30.49	5.00e-34	139.00
IUUC-Lma-053312	Leptosphaeria maculans	28.76	1.00e-14	75.50
IUUC-Laf-054267	Loxodonta africana	84.70	2.00e-167	583.00
IUUC-Mcc-055240	Macaca mulatta	84.99	2.00e-167	582.00
IUUC-Mpo-057568	Magnaporthe poae	27.93	1.00e-12	68.60
IUUC-Mvi-060341	Microbotryum violaceum	28.67	4.00e-23	103.00
IUUC-Mmr-061177	Microcebus murinus	67.92	0.00e+00	963.00
IUUC-Mdo-062415	Monodelphis domestica	85.88	7.00e-165	574.00
IUUC-Mmu-063981	Mus musculus	68.15	0.00e+00	971.00
IUUC-Mac-065103	Musa acuminata	30.03	7.00e-41	162.00
IUUC-Mpu-066498	Mustela putorius furo	84.70	2.00e-167	583.00
IUUC-Mlu-067242	Myotis lucifugus	84.70	1.00e-167	583.00
IUUC-Ont-071299	Oreochromis niloticus	84.75	2.00e-159	556.00
IUUC-Ocu-073799	Oryctolagus cuniculus	84.99	4.00e-168	585.00
IUUC-Oba-075000	Oryza barthii	32.94	1.00e-29	124.00
IUUC-Obr-076532	Oryza brachyantha	28.65	4.00e-30	126.00
IUUC-Ogl-077200	Oryza glaberrima	29.48	5.00e-31	129.00
IUUC-Ogu-078279	Oryza glumaepatula	32.94	1.00e-29	124.00
IUUC-Oin-079097	Oryza indica	29.48	5.00e-31	129.00
IUUC-Ome-081304	Oryza meridionalis	29.05	9.00e-30	125.00
IUUC-Oni-082162	Oryza nivara	32.94	1.00e-29	124.00
IUUC-Opu-083683	Oryza punctata	48.48	2.00e-16	81.30
IUUC-Oru-084382	Oryza rufipogon	32.94	1.00e-29	124.00
IUUC-Osa-085839	Oryza sativa	48.48	2.00e-16	81.30
IUUC-Ola-086435	Oryzias latipes	85.04	7.00e-155	541.00
IUUC-Oga-089016	Otolemur garnettii	84.70	2.00e-167	583.00
IUUC-Oar-089589	Ovis aries	84.42	4.00e-167	582.00
IUUC-Pan-092502	Papio anubis	84.99	3.00e-167	582.00
IUUC-Ppa-095651	Physcomitrella patens	34.14	4.00e-38	153.00
IUUC-Pab-098619	Pongo abelii	84.99	1.00e-167	583.00
IUUC-Pop-099583	Populus trichocarpa	28.82	1.00e-33	137.00
IUUC-Pca-100544	Procavia capensis	84.70	3.00e-167	582.00
IUUC-Ppe-102065	Prunus persica	30.74	9.00e-32	132.00
IUUC-Pva-102479	Pteropus vampyrus	84.14	4.00e-167	582.00
IUUC-Pgr-103536	Puccinia graminis	27.24	4.00e-22	100.00
IUUC-Ptt-104014	Puccinia triticina	33.33	4.00e-03	36.60
IUUC-Pte-104415	Pyrenophora teres	29.47	2.00e-13	71.20
IUUC-Pyt-104762	Pyrenophora triticirepentis	29.47	1.00e-13	71.60
IUUC-Sce-106384	Saccharomyces cerevisiae	25.37	2.00e-17	84.00
IUUC-Sha-107602	Sarcophilus harrisii	85.88	4.00e-165	575.00
IUUC-Sja-107993	Schizosaccharomyces japonicus	29.66	2.00e-12	67.40
IUUC-Spo-108304	Schizosaccharomyces pombe	43.08	2.00e-14	74.30
IUUC-Ssl-108546	Sclerotinia sclerotiorum	26.34	1.00e-08	54.70
IUUC-Sit-109889	Setaria italica	28.65	5.00e-33	136.00
IUUC-Sly-111490	Solanum lycopersicum	32.13	2.00e-38	154.00
IUUC-Sbi-114734	Sorghum bicolor	30.90	2.00e-25	108.00
IUUC-Sre-115087	Sporisorium reilianum	25.72	1.00e-16	82.00
IUUC-Ssc-116134	Sus scrofa	66.86	0.00e+00	940.00
IUUC-Tru-117867	Takifugu rubripes	84.75	8.00e-160	557.00
IUUC-Tni-120802	Tetraodon nigroviridis	84.75	5.00e-159	555.00
IUUC-Tca-121060	Theobroma cacao	30.30	3.00e-37	150.00
IUUC-Tvi-122431	Trichoderma virens	39.62	2.00e-09	57.80
IUUC-Tae-122767	Triticum aestivum	27.95	4.00e-30	126.00
IUUC-Tme-127177	Tuber melanosporum	23.69	3.00e-12	67.00
IUUC-Tbe-127597	Tupaia belangeri	66.26	0.00e+00	758.00
IUUC-Ttr-128303	Tursiops truncatus	84.14	5.00e-165	575.00
IUUC-Uma-129488	Ustilago maydis	26.21	3.00e-17	83.60
IUUC-Vvi-131316	Vitis vinifera	29.19	7.00e-34	139.00
IUUC-Xtr-132906	Xenopus tropicalis	83.33	2.00e-154	539.00
IUUC-Xma-133607	Xiphophorus maculatus	85.31	5.00e-159	555.00
IUUC-Yli-134445	Yarrowia lipolytica	36.14	6.00e-13	69.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence