iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076631

Ensembl Protein ID

OB06G19220.1

UniProt Accession

J3MD28; J3MD28_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB06G19220	OB06G19220.1	OB06G19220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	1.40e-23	82.9	162	203
ULD/UDP/UBQ/UBQ_PIM	3.70e-23	81.9	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e+ ++q+ +MG   ++r+ +++aLraa+nn+e+A++yL++g
   Q: 162  LEETIQQILDMGggtWERDMVVRALRAAYNNPERAIDYLYSG 203
           799************************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkl+vktlkg++fe+e+s++ +v+e+K+ i++ +g   +p++qq LI++GkiLkDdttL+ +++ ++s+++++++k+k
   Q: 1    MKLFVKTLKGTNFEIEASPEASVAEVKKIIETTQGqnvYPADQQMLIHQGKILKDDTTLEGNKVAENSFLVIMLSKAK 78
           99*************************************************************************987 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MKLFVKTLKG TNFEIEASPE ASVAEVKKII ETTQGQNVYP ADQQMLIHQG KILKDDTTLE 60
GNKVAENSFL VIMLSKAKAS SSGASTASKA PVSQAQPATP VVPVTPVART PPPQAPAAAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCTCGCGA GCGAACCGGA AGTCCAAGGG GAAGGAAGGC GGAGAGGAGA AACCCTCGAA 60
GCGAAGAGTA GGGGTAGGGA TATCGCGAGA GTGAGAGAGA GAGGAGGCTA GGAGGCGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

obr:102714102

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000126	Aegilops tauschii	76.28	4.00e-127	447.00
IUUC-Atr-003116	Amborella trichopoda	66.79	6.00e-83	300.00
IUUC-Aly-005486	Arabidopsis lyrata	60.10	6.00e-105	373.00
IUUC-Bdi-014718	Brachypodium distachyon	76.07	2.00e-142	497.00
IUUC-Bol-015354	Brassica oleracea	68.32	4.00e-84	303.00
IUUC-Bra-016769	Brassica rapa	66.42	2.00e-84	305.00
IUUC-Gma-044370	Glycine max	66.16	1.00e-86	311.00
IUUC-Hvu-047788	Hordeum vulgare	72.76	2.00e-76	278.00
IUUC-Lpe-051087	Leersia perrieri	62.50	3.00e-82	297.00
IUUC-Mtr-058148	Medicago truncatula	64.77	2.00e-88	318.00
IUUC-Mvi-060220	Microbotryum violaceum	43.57	8.00e-23	100.00
IUUC-Mac-065180	Musa acuminata	66.58	1.00e-120	425.00
IUUC-Oba-075951	Oryza barthii	83.41	3.00e-146	510.00
IUUC-Ogl-077152	Oryza glaberrima	83.41	3.00e-146	510.00
IUUC-Ogu-078896	Oryza glumaepatula	83.41	4.00e-146	509.00
IUUC-Oin-079845	Oryza indica	79.71	2.00e-146	511.00
IUUC-Olo-081091	Oryza longistaminata	68.29	1.00e-107	382.00
IUUC-Ome-081953	Oryza meridionalis	78.80	8.00e-142	495.00
IUUC-Oni-082569	Oryza nivara	79.47	7.00e-146	509.00
IUUC-Opu-083655	Oryza punctata	83.41	1.00e-141	495.00
IUUC-Oru-084989	Oryza rufipogon	79.47	7.00e-146	509.00
IUUC-Osa-085709	Oryza sativa	79.47	7.00e-146	509.00
IUUC-Pop-099416	Populus trichocarpa	55.56	1.00e-105	374.00
IUUC-Pca-100348	Procavia capensis	31.71	2.00e-36	145.00
IUUC-Ppe-101830	Prunus persica	62.90	6.00e-104	369.00
IUUC-Ptt-103717	Puccinia triticina	44.44	2.00e-23	102.00
IUUC-Pte-104303	Pyrenophora teres	43.12	5.00e-20	91.30
IUUC-Pyt-104580	Pyrenophora triticirepentis	43.12	6.00e-20	90.90
IUUC-Sit-110235	Setaria italica	78.76	7.00e-96	343.00
IUUC-Sly-111899	Solanum lycopersicum	62.90	1.00e-116	411.00
IUUC-Stu-112027	Solanum tuberosum	62.89	5.00e-118	416.00
IUUC-Sbi-114835	Sorghum bicolor	81.48	8.00e-96	342.00
IUUC-Tae-125230	Triticum aestivum	79.47	2.00e-130	458.00
IUUC-Tur-126101	Triticum urartu	75.59	1.00e-96	345.00
IUUC-Vvi-130842	Vitis vinifera	67.29	1.00e-88	318.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence