iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114835

Ensembl Protein ID

Sb10g009520.1

UniProt Accession

A0A194YIG2; A0A194YIG2_SORBI

Genbank Protein ID

KXG19738.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G108900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g009520	Sb10g009520.1	Sb10g009520.1
Sb10g009520	Sb10g009520.2	Sb10g009520.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	2.00e-23	82.6	163	204
ULD/UDP/UBQ/UBQ_PIM	2.80e-23	82.4	1	78

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMG...FdreealqaLraannnleaAveyLldg 41
           +e+ ++q+ +MG   ++r+++++aLraa+nn+e+A++yL++g
   Q: 163  LEQTIQQILDMGggtWERDTVVRALRAAYNNPERAIDYLYSG 204
           589************************************986 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesg...vppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkksk 75
           mkl+vktlkg++fe+e+s+d +v+e+K  i++ +g   +p++qq LIy+GkiLkD+ttL+ +g+ ++s+++++++k+k
   Q: 1    MKLNVKTLKGTNFEIEASPDASVAEVKRIIETTQGqstYPADQQMLIYQGKILKDETTLEGNGVAENSFLVIMLSKAK 78
           99*************************************************************************987 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MKLNVKTLKG TNFEIEASPD ASVAEVKRII ETTQGQSTYP ADQQMLIYQG KILKDETTLE 60
GNGVAENSFL VIMLSKAKAS SSGASTATAA KAPATPAQPA APVAPVAPAT SVARAPTQAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTCGCTTC CCCGTGCGCT CTCGTCGTCT TCGCGAGGTC GAACCCCCAA CCCCAACCCC 60
AAGGCGAGGT GACGAAACCC TCCTCCCCAC GGAGTCAGCC CACGCGAGGA GGGTGAGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA
SM00213--UBQ

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000126	Aegilops tauschii	80.78	5.00e-97	347.00
IUUC-Atr-003116	Amborella trichopoda	64.49	1.00e-86	312.00
IUUC-Apl-003371	Anas platyrhynchos	32.41	4.00e-32	131.00
IUUC-Ath-006688	Arabidopsis thaliana	59.61	5.00e-96	343.00
IUUC-Afl-008605	Aspergillus flavus	38.61	2.00e-30	125.00
IUUC-Aor-010032	Aspergillus oryzae	38.61	2.00e-30	125.00
IUUC-Bdi-014718	Brachypodium distachyon	73.25	2.00e-142	498.00
IUUC-Bol-015354	Brassica oleracea	67.95	3.00e-86	310.00
IUUC-Bra-016769	Brassica rapa	67.57	5.00e-87	313.00
IUUC-Cne-027056	Cryptococcus neoformans	38.46	2.00e-11	62.40
IUUC-Cme-027260	Cyanidioschyzon merolae	27.33	8.00e-25	107.00
IUUC-Hvu-047788	Hordeum vulgare	76.33	4.00e-75	274.00
IUUC-Lpe-050801	Leersia perrieri	77.27	2.00e-99	354.00
IUUC-Mla-058961	Melampsora laricipopulina	41.13	2.00e-23	102.00
IUUC-Mvi-060220	Microbotryum violaceum	43.57	1.00e-21	96.70
IUUC-Mac-065180	Musa acuminata	58.77	2.00e-113	401.00
IUUC-Ncr-068685	Neurospora crassa	37.45	4.00e-29	121.00
IUUC-Oba-075951	Oryza barthii	83.21	2.00e-104	371.00
IUUC-Obr-076631	Oryza brachyantha	83.27	2.00e-101	361.00
IUUC-Ogl-077152	Oryza glaberrima	83.21	2.00e-104	371.00
IUUC-Ogu-078896	Oryza glumaepatula	83.21	2.00e-104	371.00
IUUC-Oin-079845	Oryza indica	83.21	3.00e-104	370.00
IUUC-Olo-081091	Oryza longistaminata	83.46	5.00e-106	377.00
IUUC-Ome-081953	Oryza meridionalis	81.92	2.00e-97	348.00
IUUC-Oni-082569	Oryza nivara	83.21	2.00e-104	371.00
IUUC-Opu-083655	Oryza punctata	78.63	4.00e-100	357.00
IUUC-Oru-084989	Oryza rufipogon	83.21	2.00e-104	371.00
IUUC-Osa-085709	Oryza sativa	83.21	2.00e-104	371.00
IUUC-Ppa-095654	Physcomitrella patens	61.33	2.00e-74	271.00
IUUC-Pgr-103618	Puccinia graminis	35.74	2.00e-23	102.00
IUUC-Ptt-103717	Puccinia triticina	47.01	5.00e-25	107.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	38.83	4.00e-16	78.20
IUUC-Sit-110235	Setaria italica	86.17	1.00e-103	368.00
IUUC-Sly-111609	Solanum lycopersicum	67.57	1.00e-88	319.00
IUUC-Stu-112027	Solanum tuberosum	61.67	1.00e-123	435.00
IUUC-Tca-121661	Theobroma cacao	67.94	7.00e-85	306.00
IUUC-Tae-125230	Triticum aestivum	85.66	9.00e-100	356.00
IUUC-Tur-126101	Triticum urartu	80.43	1.00e-96	345.00
IUUC-Tbe-127603	Tupaia belangeri	41.30	1.00e-20	93.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence