iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-111956

Ensembl Protein ID

PGSC0003DMT400073944

UniProt Accession

M1CSW3; M1CSW3_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400028735	PGSC0003DMT400073944	PGSC0003DMT400073944

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-44	148.9	108	145
UBD/Beta-Prp	1.00e-70	239.5	57	235

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gHtdsv++laf sd  ll+sGs Dg+i+vWD+++g l 
   Q: 108  GHTDSVSSLAFsSDgQLLASGSLDGNIRVWDITSGGLK 145
           8***********999******************99875 PP

UBD/Beta-Prp

   S: 84   gkcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
            + +ht++gh+ ++++++ sp++ + +v+G+ d+   +w++ +g      l+gh+++v+++++++dg+ll+sGslD+ +r+Wd+ +g l
   Q: 57   DDSLHTFTGHTGELYTVTCSPTDaSLVVTGGGDDRGFMWKIGQGDFAF-ELQGHTDSVSSLAFSSDGQLLASGSLDGNIRVWDITSGGL 144
           6789*****************77799******************9998.9*************************************** PP
   S: 172  lrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
            +tl+g  ++ ++++ +++ g  +++gs+d+++ +w+  t+  ++t+ gh   v++ +f+p+++++ +gs+D ++riWd +s + ++++
   Q: 145  KDTLEG-PEKGIEWVRWHPRGHVVLAGSEDSSIWMWNADTNAFMNTFLGHAGSVTCGDFTPDGKLICTGSDDATLRIWDPKSAQSIHVV 232
           *****9.******************************************************************************9998 PP
   S: 261  qlh 263
            +h
   Q: 233  RGH 235
           876 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MNYPSPHHED DEHEDEVFLE DSDIIEEINV DEEELVDADD DDEEDEQGGG EFMDEADDSL 60
HTFTGHTGEL YTVTCSPTDA SLVVTGGGDD RGFMWKIGQG DFAFELQGHT DSVSSLAFSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTATC CATCACCCCA CCACGAAGAC GATGAACACG AAGATGAGGT CTTCTTAGAG 60
GATAGTGATA TCATTGAAGA AATTAATGTT GATGAAGAAG GTAGGAAAAA AATCCAATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sot:102586442

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000794	Aegilops tauschii	60.61	1.00e-120	425.00
IUUC-Aml-001781	Ailuropoda melanoleuca	36.90	4.00e-63	234.00
IUUC-Atr-003169	Amborella trichopoda	67.05	3.00e-144	503.00
IUUC-Aca-004594	Anolis carolinensis	37.04	8.00e-61	226.00
IUUC-Aly-006277	Arabidopsis lyrata	62.50	3.00e-128	450.00
IUUC-Ath-007701	Arabidopsis thaliana	66.96	5.00e-140	489.00
IUUC-Ame-011651	Astyanax mexicanus	34.83	1.00e-55	209.00
IUUC-Bta-012833	Bos taurus	37.46	2.00e-63	235.00
IUUC-Bdi-014289	Brachypodium distachyon	62.39	1.00e-127	448.00
IUUC-Bol-015389	Brassica oleracea	66.86	3.00e-140	489.00
IUUC-Bra-017115	Brassica rapa	63.93	7.00e-124	436.00
IUUC-Cel-018305	Caenorhabditis elegans	25.20	8.00e-29	120.00
IUUC-Cja-019433	Callithrix jacchus	37.18	6.00e-63	233.00
IUUC-Cfa-020093	Canis familiaris	37.18	4.00e-63	234.00
IUUC-Cpo-021742	Cavia porcellus	37.18	4.00e-63	234.00
IUUC-Cre-022781	Chlamydomonas reinhardtii	42.24	4.00e-73	267.00
IUUC-Csa-023498	Chlorocebus sabaeus	37.18	5.00e-63	233.00
IUUC-Cho-024628	Choloepus hoffmanni	36.84	4.00e-49	187.00
IUUC-Cin-025244	Ciona intestinalis	35.73	2.00e-58	218.00
IUUC-Csv-026218	Ciona savignyi	34.01	8.00e-54	202.00
IUUC-Dre-028528	Danio rerio	36.21	2.00e-59	222.00
IUUC-Dno-029297	Dasypus novemcinctus	37.18	7.00e-63	233.00
IUUC-Ete-033100	Echinops telfairi	41.31	2.00e-42	164.00
IUUC-Eca-034277	Equus caballus	37.18	7.00e-63	233.00
IUUC-Fca-036115	Felis catus	37.18	5.00e-63	233.00
IUUC-Fal-036864	Ficedula albicollis	37.75	2.00e-66	244.00
IUUC-Gmo-039090	Gadus morhua	34.19	7.00e-43	166.00
IUUC-Gga-040545	Gallus gallus	38.03	3.00e-66	244.00
IUUC-Gac-042027	Gasterosteus aculeatus	38.48	1.00e-65	242.00
IUUC-Gma-044168	Glycine max	67.36	8.00e-145	505.00
IUUC-Ggo-045036	Gorilla gorilla	37.18	9.00e-63	233.00
IUUC-Hsa-046749	Homo sapiens	37.18	9.00e-63	233.00
IUUC-Hvu-047217	Hordeum vulgare	59.16	4.00e-125	439.00
IUUC-Itr-048114	Ictidomys tridecemlineatus	37.18	5.00e-63	233.00
IUUC-Lch-049747	Latimeria chalumnae	32.31	9.00e-50	189.00
IUUC-Lpe-051433	Leersia perrieri	59.88	3.00e-122	430.00
IUUC-Loc-052406	Lepisosteus oculatus	38.68	2.00e-64	238.00
IUUC-Laf-053901	Loxodonta africana	37.18	9.00e-63	233.00
IUUC-Mcc-054990	Macaca mulatta	37.18	7.00e-63	233.00
IUUC-Meu-056844	Macropus eugenii	37.04	1.00e-59	222.00
IUUC-Mtr-057759	Medicago truncatula	66.57	2.00e-130	457.00
IUUC-Mla-058856	Melampsora laricipopulina	32.67	3.00e-49	187.00
IUUC-Mga-059749	Meleagris gallopavo	37.46	1.00e-65	242.00
IUUC-Mvi-060237	Microbotryum violaceum	33.52	1.00e-57	216.00
IUUC-Mmr-061270	Microcebus murinus	37.76	5.00e-60	223.00
IUUC-Mdo-062965	Monodelphis domestica	36.75	1.00e-60	225.00
IUUC-Mmu-064081	Mus musculus	37.46	9.00e-64	236.00
IUUC-Mac-065236	Musa acuminata	64.69	1.00e-133	467.00
IUUC-Mpu-066355	Mustela putorius furo	37.18	6.00e-63	233.00
IUUC-Mlu-067630	Myotis lucifugus	36.24	6.00e-61	226.00
IUUC-Nle-069701	Nomascus leucogenys	37.18	6.00e-63	233.00
IUUC-Opr-070337	Ochotona princeps	33.80	3.00e-51	194.00
IUUC-Ont-072614	Oreochromis niloticus	36.73	1.00e-61	229.00
IUUC-Ocu-073912	Oryctolagus cuniculus	37.18	8.00e-63	233.00
IUUC-Oba-075195	Oryza barthii	61.77	6.00e-122	429.00
IUUC-Obr-076059	Oryza brachyantha	60.47	2.00e-125	440.00
IUUC-Ogl-077318	Oryza glaberrima	61.06	3.00e-125	440.00
IUUC-Ogu-078579	Oryza glumaepatula	61.40	7.00e-123	432.00
IUUC-Oin-079340	Oryza indica	61.06	3.00e-125	440.00
IUUC-Olo-080813	Oryza longistaminata	62.01	3.00e-123	433.00
IUUC-Ome-081420	Oryza meridionalis	61.77	5.00e-122	429.00
IUUC-Oni-082650	Oryza nivara	61.77	6.00e-122	429.00
IUUC-Opu-083832	Oryza punctata	61.47	1.00e-121	428.00
IUUC-Oru-084207	Oryza rufipogon	61.77	6.00e-122	429.00
IUUC-Osa-085708	Oryza sativa	61.06	3.00e-125	440.00
IUUC-Ola-087164	Oryzias latipes	37.32	4.00e-62	230.00
IUUC-Olu-087824	Ostreococcus lucimarinus	43.70	5.00e-66	243.00
IUUC-Oga-088864	Otolemur garnettii	37.18	6.00e-63	233.00
IUUC-Oar-090115	Ovis aries	37.18	5.00e-63	233.00
IUUC-Ptr-091398	Pan troglodytes	37.18	7.00e-63	233.00
IUUC-Pan-092002	Papio anubis	37.18	8.00e-63	233.00
IUUC-Psi-093979	Pelodiscus sinensis	39.41	8.00e-33	132.00
IUUC-Pma-094618	Petromyzon marinus	33.15	3.00e-54	204.00
IUUC-Ppa-095351	Physcomitrella patens	59.59	3.00e-119	420.00
IUUC-Pfo-097078	Poecilia formosa	37.03	8.00e-62	229.00
IUUC-Pab-098540	Pongo abelii	37.18	6.00e-63	233.00
IUUC-Pop-099140	Populus trichocarpa	73.16	8.00e-153	531.00
IUUC-Pca-101072	Procavia capensis	37.46	3.00e-58	218.00
IUUC-Ppe-101979	Prunus persica	74.04	7.00e-153	532.00
IUUC-Pva-102400	Pteropus vampyrus	32.51	2.00e-50	191.00
IUUC-Pgr-103362	Puccinia graminis	30.25	2.00e-47	182.00
IUUC-Ptt-103756	Puccinia triticina	33.33	1.00e-35	142.00
IUUC-Rno-105672	Rattus norvegicus	37.18	3.00e-63	234.00
IUUC-Sja-107693	Schizosaccharomyces japonicus	29.77	5.00e-48	184.00
IUUC-Spo-108208	Schizosaccharomyces pombe	29.77	4.00e-48	184.00
IUUC-Smo-109093	Selaginella moellendorffii	52.91	5.00e-103	366.00
IUUC-Sit-109978	Setaria italica	63.42	2.00e-130	457.00
IUUC-Sly-111316	Solanum lycopersicum	97.66	0.00e+00	684.00
IUUC-Sbi-114189	Sorghum bicolor	62.54	3.00e-125	440.00
IUUC-Sre-115029	Sporisorium reilianum	35.99	4.00e-54	204.00
IUUC-Ssc-116045	Sus scrofa	33.24	1.00e-46	179.00
IUUC-Tgu-117514	Taeniopygia guttata	37.46	4.00e-66	243.00
IUUC-Tru-117851	Takifugu rubripes	36.39	4.00e-62	231.00
IUUC-Tsy-119140	Tarsius syrichta	34.45	3.00e-54	204.00
IUUC-Tni-120248	Tetraodon nigroviridis	37.54	2.00e-63	235.00
IUUC-Tca-121686	Theobroma cacao	67.81	7.00e-140	489.00
IUUC-Tae-125689	Triticum aestivum	61.76	2.00e-125	441.00
IUUC-Tur-126174	Triticum urartu	61.70	3.00e-121	427.00
IUUC-Tme-127079	Tuber melanosporum	29.53	1.00e-16	79.70
IUUC-Ttr-128182	Tursiops truncatus	37.18	1.00e-62	233.00
IUUC-Uma-129624	Ustilago maydis	34.90	5.00e-52	197.00
IUUC-Vpa-130605	Vicugna pacos	35.53	1.00e-49	189.00
IUUC-Vvi-131319	Vitis vinifera	68.77	2.00e-151	527.00
IUUC-Xtr-132193	Xenopus tropicalis	36.16	4.00e-65	240.00
IUUC-Xma-133880	Xiphophorus maculatus	37.03	3.00e-62	231.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence