iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016660

Ensembl Protein ID

Bra026663.1-P

UniProt Accession

M4ED03; M4ED03_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra026663	Bra026663.1	Bra026663.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-06	27.6	200	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 8    claf..sdtllvs.GsdDgtikvWDlr 31
            l f  s+++lvs G+    ++vWD++
   Q: 200  NLTFseSGKFLVSlGG--PLCRVWDVK 224
           5667655477777444..4599***85 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MANQTTESNQ LSNTQTYGFP IYAADWIPEE TVRSKIDKDQ DNSEDGDESS SSTSRSCIVL 60
AGGGGEGRSG IKNVILICRV DLDTKSLSEQ PLGRIVLGTD LPYRMAVHPR GGGLVCALPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAATC AAACCACAGA GAGCAATCAA CTGTCGAATA CGCAGACCTA CGGCTTCCCG 60
ATCTACGCCG CCGACTGGAT CCCGGAAGAA ACCGTTAGAT CGAAAATCGA CAAGGATCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000155	Aegilops tauschii	36.43	2.00e-39	155.00
IUUC-Atr-002477	Amborella trichopoda	38.03	3.00e-38	152.00
IUUC-Aly-005479	Arabidopsis lyrata	75.57	8.00e-151	526.00
IUUC-Ath-007466	Arabidopsis thaliana	75.63	2.00e-149	521.00
IUUC-Bdi-014110	Brachypodium distachyon	44.01	2.00e-67	249.00
IUUC-Cel-018480	Caenorhabditis elegans	25.62	1.00e-07	50.80
IUUC-Gma-043946	Glycine max	47.78	1.00e-84	306.00
IUUC-Lpe-051586	Leersia perrieri	41.96	5.00e-74	271.00
IUUC-Mtr-058661	Medicago truncatula	47.78	2.00e-88	318.00
IUUC-Mvi-060443	Microbotryum violaceum	19.74	5.00e-10	58.90
IUUC-Mac-064955	Musa acuminata	49.30	5.00e-89	320.00
IUUC-Oba-075587	Oryza barthii	39.71	3.00e-69	255.00
IUUC-Obr-076826	Oryza brachyantha	42.94	4.00e-75	275.00
IUUC-Ogl-077927	Oryza glaberrima	45.09	4.00e-67	248.00
IUUC-Ogu-078241	Oryza glumaepatula	45.09	4.00e-67	248.00
IUUC-Oin-080217	Oryza indica	45.45	9.00e-68	250.00
IUUC-Olo-081060	Oryza longistaminata	44.08	9.00e-55	207.00
IUUC-Ome-082007	Oryza meridionalis	41.26	3.00e-70	258.00
IUUC-Oni-082827	Oryza nivara	45.45	9.00e-68	250.00
IUUC-Opu-083159	Oryza punctata	41.80	3.00e-72	265.00
IUUC-Oru-085039	Oryza rufipogon	45.45	9.00e-68	250.00
IUUC-Osa-086258	Oryza sativa	45.45	9.00e-68	250.00
IUUC-Ppa-095329	Physcomitrella patens	39.62	3.00e-49	188.00
IUUC-Pop-099618	Populus trichocarpa	52.29	2.00e-96	345.00
IUUC-Ppe-101864	Prunus persica	52.57	2.00e-82	298.00
IUUC-Pgr-103489	Puccinia graminis	30.30	7.00e-07	48.10
IUUC-Ptt-103883	Puccinia triticina	30.30	3.00e-11	62.40
IUUC-Smo-109265	Selaginella moellendorffii	38.31	2.00e-50	192.00
IUUC-Sly-111551	Solanum lycopersicum	51.37	1.00e-86	313.00
IUUC-Stu-112264	Solanum tuberosum	50.15	5.00e-84	304.00
IUUC-Tca-121083	Theobroma cacao	52.99	3.00e-104	371.00
IUUC-Tae-124218	Triticum aestivum	46.91	9.00e-69	253.00
IUUC-Tur-126597	Triticum urartu	36.54	4.00e-31	127.00
IUUC-Uma-129598	Ustilago maydis	20.36	3.00e-11	62.80
IUUC-Vvi-131024	Vitis vinifera	51.27	3.00e-94	338.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence