iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-086683

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04051842

Gene Name

UBR1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000016076.2	ENSORLT00000020119.2	ENSORLP00000020118.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/N-recognin/N-domain	1.90e-31	108.3	199	274
E3 activity/RING/RING	3.40e-07	31.0	1067	1173
E3 activity/N-recognin/UBR-box	8.40e-28	97.0	70	139

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/N-recognin/N-domain

   S: 1    YylvLfNDEkHsyeqviyslqkAleleqkeakkfatiidkeGRravkaGdyavceeakkeilknseklaqipLkVe 76
           Yy+vL+NDE+Hsy++viy+lq+ ++++q+eak ++t idkeGRravk G+   c++ak+ i++nse+++  pL+Ve
   Q: 199  YYCVLYNDEHHSYDHVIYTLQRSVNCNQDEAKTHTTLIDKEGRRAVKRGTLRSCQQAKDLIKSNSEHISLQPLRVE 274
           9**************************************************************************8 PP

E3 activity/RING/RING

   S: 1    CaiCledf...............kd................................gplvlpCgHvfhadClqkw........... 29
           C++C+e+                ++                                g+++++CgHv+ha+C+qk+           
   Q: 1067 CILCQEEQevlphaaamvltvcvQRstvltqcrgkiptikadgsgtyplftppnlaiGTHTGSCGHVMHATCWQKYfeadqnttrsr 1153
           7888666644444443333333311444444444555555555555555555544446899***************99999999999 PP
   S: 30   ...pglknssskefrCPlCr 46
               +  +++++e +CPlC+
   Q: 1154 lhaELIIDLENGEYLCPLCK 1173
           999888888999999****6 PP

E3 activity/N-recognin/UBR-box

   S: 1    slCgrvfkvgetiyeCrtCsvdetlvlCteCfakvvHkdHeyklkksggggfCdCGdteAwedgskCkkl 70
           +lCgrvfk get+y+Cr+C++d+t+vlC++Cf+++vHk H+yk++ s+gggfCdCGd eAw+ g+ C k+
   Q: 70   QLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQDSVHKSHRYKMHASSGGGFCDCGDVEAWKIGPCCSKH 139
           68***************************************************************99988 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

WQQASDCRAE LLGYLKEQVP QIFCLRKEYS PQEEEELLQS RLLHPLECFL FGEDPQQGLE 60
KLKQGSTSSQ LCGRVFKEGE TVYSCRDCAI DPTCVLCMDC FQDSVHKSHR YKMHASSGGG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGGCAGCAGG CTTCAGACTG CAGAGCCGAG CTGCTCGGTT ACCTGAAGGA GCAGGTGCCA 60
CAGATCTTTT GTCTGAGGAA GGAGTACAGC CCCCAGGAGG AAGAGGAGCT CCTGCAAAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR003769--ClpS_core
IPR014719--Ribosomal_L7/12_C/ClpS-like
IPR011991--WHTH_DNA-bd_dom
IPR013083--Znf_RING/FYVE/PHD
IPR003126--Znf_UBR

PROSITE

PS51157--ZF_UBR

Pfam

PF02617--ClpS
PF02207--zf-UBR

SMART

SM00396--ZnF_UBR1

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0030163--P:protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001354	Ailuropoda melanoleuca	56.90	0.00e+00	1934.00
IUUC-Apl-004160	Anas platyrhynchos	58.16	0.00e+00	1999.00
IUUC-Aca-004982	Anolis carolinensis	56.71	0.00e+00	1937.00
IUUC-Acl-008055	Aspergillus clavatus	24.60	4.00e-34	141.00
IUUC-Afl-008479	Aspergillus flavus	24.12	1.00e-42	169.00
IUUC-Ani-009334	Aspergillus nidulans	23.43	1.00e-44	176.00
IUUC-Aor-010124	Aspergillus oryzae	24.12	4.00e-42	167.00
IUUC-Ate-010550	Aspergillus terreus	23.99	9.00e-46	180.00
IUUC-Ame-011231	Astyanax mexicanus	72.33	0.00e+00	2444.00
IUUC-Bta-012347	Bos taurus	57.53	0.00e+00	1944.00
IUUC-Bci-013834	Botrytis cinerea	23.53	8.00e-35	143.00
IUUC-Cja-018911	Callithrix jacchus	55.91	0.00e+00	1919.00
IUUC-Cfa-020991	Canis familiaris	57.47	0.00e+00	1959.00
IUUC-Cpo-021448	Cavia porcellus	56.54	0.00e+00	1936.00
IUUC-Cre-022936	Chlamydomonas reinhardtii	29.17	2.30e-01	29.30
IUUC-Csa-024255	Chlorocebus sabaeus	57.62	0.00e+00	1625.00
IUUC-Cho-024550	Choloepus hoffmanni	44.76	0.00e+00	1379.00
IUUC-Csv-026033	Ciona savignyi	42.86	2.00e-10	58.20
IUUC-Cne-026823	Cryptococcus neoformans	22.78	3.00e-34	141.00
IUUC-Dre-028643	Danio rerio	68.63	0.00e+00	1447.00
IUUC-Dno-029427	Dasypus novemcinctus	56.46	0.00e+00	1902.00
IUUC-Dor-031073	Dipodomys ordii	50.90	0.00e+00	857.00
IUUC-Eca-033348	Equus caballus	56.86	0.00e+00	1837.00
IUUC-Eeu-034664	Erinaceus europaeus	53.76	0.00e+00	1151.00
IUUC-Fca-035604	Felis catus	55.78	0.00e+00	941.00
IUUC-Fal-037333	Ficedula albicollis	58.89	0.00e+00	2002.00
IUUC-Gmo-039363	Gadus morhua	71.29	0.00e+00	2160.00
IUUC-Gga-040486	Gallus gallus	57.65	0.00e+00	1938.00
IUUC-Gac-041985	Gasterosteus aculeatus	80.16	0.00e+00	2494.00
IUUC-Ggo-044704	Gorilla gorilla	53.25	0.00e+00	1501.00
IUUC-Hsa-046753	Homo sapiens	57.78	0.00e+00	1982.00
IUUC-Itr-048410	Ictidomys tridecemlineatus	57.26	0.00e+00	1951.00
IUUC-Lch-049904	Latimeria chalumnae	58.36	0.00e+00	1936.00
IUUC-Loc-052624	Lepisosteus oculatus	71.07	0.00e+00	2368.00
IUUC-Laf-053857	Loxodonta africana	55.59	0.00e+00	1903.00
IUUC-Mcc-054873	Macaca mulatta	57.61	0.00e+00	1952.00
IUUC-Meu-056858	Macropus eugenii	47.41	0.00e+00	716.00
IUUC-Mor-057051	Magnaporthe oryzae	25.09	2.00e-37	152.00
IUUC-Mla-058963	Melampsora laricipopulina	25.34	3.00e-59	224.00
IUUC-Mga-059917	Meleagris gallopavo	58.21	0.00e+00	2023.00
IUUC-Mmr-061128	Microcebus murinus	54.63	0.00e+00	1801.00
IUUC-Mdo-062306	Monodelphis domestica	57.54	0.00e+00	1945.00
IUUC-Mmu-063389	Mus musculus	57.41	0.00e+00	1977.00
IUUC-Mpu-065983	Mustela putorius furo	57.47	0.00e+00	1973.00
IUUC-Mlu-068013	Myotis lucifugus	55.82	0.00e+00	1883.00
IUUC-Nfi-068403	Neosartorya fischeri	24.40	1.00e-46	182.00
IUUC-Nle-070031	Nomascus leucogenys	57.84	0.00e+00	1982.00
IUUC-Ont-072035	Oreochromis niloticus	82.27	0.00e+00	2870.00
IUUC-Ocu-074930	Oryctolagus cuniculus	54.78	0.00e+00	1875.00
IUUC-Osa-086106	Oryza sativa	38.38	1.00e-10	61.60
IUUC-Oga-088017	Otolemur garnettii	54.30	0.00e+00	1848.00
IUUC-Oar-089557	Ovis aries	57.32	0.00e+00	1939.00
IUUC-Ptr-091366	Pan troglodytes	57.09	0.00e+00	1950.00
IUUC-Pan-092184	Papio anubis	57.61	0.00e+00	1951.00
IUUC-Psi-093720	Pelodiscus sinensis	57.10	0.00e+00	1919.00
IUUC-Ppa-095780	Physcomitrella patens	21.05	2.00e-24	108.00
IUUC-Pfo-097124	Poecilia formosa	82.87	0.00e+00	2867.00
IUUC-Pab-098586	Pongo abelii	57.66	0.00e+00	1974.00
IUUC-Pop-099184	Populus trichocarpa	42.55	7.00e-12	64.70
IUUC-Pca-100673	Procavia capensis	51.79	0.00e+00	999.00
IUUC-Pva-102724	Pteropus vampyrus	54.38	0.00e+00	1434.00
IUUC-Pgr-103372	Puccinia graminis	22.88	6.00e-45	177.00
IUUC-Ptt-103878	Puccinia triticina	22.89	4.00e-45	177.00
IUUC-Pte-104174	Pyrenophora teres	23.19	2.00e-44	176.00
IUUC-Sha-106993	Sarcophilus harrisii	56.78	0.00e+00	1966.00
IUUC-Sja-107980	Schizosaccharomyces japonicus	23.27	5.00e-45	177.00
IUUC-Sar-113447	Sorex araneus	54.86	0.00e+00	1294.00
IUUC-Sre-115045	Sporisorium reilianum	25.03	2.00e-45	178.00
IUUC-Ssc-115768	Sus scrofa	54.19	0.00e+00	1743.00
IUUC-Tgu-116949	Taeniopygia guttata	55.87	0.00e+00	1887.00
IUUC-Tru-117782	Takifugu rubripes	77.11	0.00e+00	2683.00
IUUC-Tsy-119177	Tarsius syrichta	53.35	0.00e+00	1112.00
IUUC-Tni-120884	Tetraodon nigroviridis	70.98	0.00e+00	2430.00
IUUC-Tme-127156	Tuber melanosporum	22.97	2.00e-47	185.00
IUUC-Tbe-128088	Tupaia belangeri	51.40	0.00e+00	733.00
IUUC-Ttr-129062	Tursiops truncatus	54.25	0.00e+00	1809.00
IUUC-Uma-129344	Ustilago maydis	25.52	2.00e-49	192.00
IUUC-Vpa-130578	Vicugna pacos	52.16	0.00e+00	1719.00
IUUC-Xtr-132244	Xenopus tropicalis	52.16	0.00e+00	1721.00
IUUC-Xma-134112	Xiphophorus maculatus	82.68	0.00e+00	2887.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence