iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-134957

UUCD1 version

UUC-ZeM-00669

Ensembl Protein ID

Zm00001d042608_T002

UniProt Accession

A0A1D6N5E0; A0A1D6N5E0_MAIZE

Genbank Protein ID

ONM35848.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM007649

Gene Name

ZEAMMB73_Zm00001d042608

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d042608	Zm00001d042608_T002	Zm00001d042608_T002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.80e-28	100.4	352	423

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +p++f+Cp+slelM+dPv+++sG+ty+r  I+kwl+ g + cP+trq+l +++l+Pn+t+++li++w e ++
   Q: 352  IPADFCCPLSLELMSDPVIVASGQTYERVFIRKWLDLGYNVCPKTRQTLGHSNLIPNYTVKQLIENWSEVHG 423
           8******************************************************************99987 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MERLVLACGG EAVNSVDDLT ERCLGWAGLV YDHVLGEEKY TFVENVKNPH SCTILIKGPN 60
DHTIAQTKDA VRDGLRSVKN TIEDGAAVLG GWELDLVRKV RKPRTRARTA RSEVGIGSSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAGGC TTGTGCTAGC ATGTGGTGGT GAAGCAGTCA ATTCAGTTGA TGACTTGACT 60
GAACGTTGTC TTGGTTGGGC TGGTCTTGTC TATGATCATG TTCTTGGAGA AGAAAAGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR002423--Cpn60/TCP-1
IPR027409--GroEL-like_apical_dom
IPR027413--GROEL-like_equatorial
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF00118--Cpn60_TCP1
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005524--F:ATP binding
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-051098	Leersia perrieri	60.73	0.00e+00	870.00
IUUC-Oba-075779	Oryza barthii	62.42	0.00e+00	937.00
IUUC-Obr-076379	Oryza brachyantha	61.93	0.00e+00	913.00
IUUC-Ogl-077086	Oryza glaberrima	63.01	0.00e+00	926.00
IUUC-Ogu-078798	Oryza glumaepatula	63.13	0.00e+00	929.00
IUUC-Oin-079685	Oryza indica	59.04	0.00e+00	935.00
IUUC-Olo-080718	Oryza longistaminata	60.71	0.00e+00	864.00
IUUC-Oni-082536	Oryza nivara	59.27	0.00e+00	935.00
IUUC-Opu-083410	Oryza punctata	62.09	0.00e+00	917.00
IUUC-Oru-084460	Oryza rufipogon	59.15	0.00e+00	934.00
IUUC-Osa-086040	Oryza sativa	63.26	0.00e+00	928.00
IUUC-Ptt-103922	Puccinia triticina	28.74	7.00e-09	54.30
IUUC-Sit-110210	Setaria italica	77.17	0.00e+00	1146.00
IUUC-Sbi-113876	Sorghum bicolor	90.68	0.00e+00	1318.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence